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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6sytC_

Fold library idPDB HeaderMoleculeTitle
c6sytC_3.45PDB header: signaling proteinChain: C: PDB Molecule: protein smg9;


Added to library: Sat Dec 14 08:41:12 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LLPPERMKHSIKLVDDQMNWCDSAIEYLLDQTDVLVVGVLGLQGTGKSMVMSLLSANTPEEDQRTYVFRA
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Known secondary structure (DSSP)






SS

TTS
B



GGG

S
B



SSSSSTTT

TTS
GGG
SS

 .........80.........90.........100.........110.........120.........130.........140
Sequence QSAEMKERGGNQTSGIDFFITQERIVFLDTQPILSPSILDHLINNYNLPHTYVEMQSLQIAAFLFTVCHV
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Known secondary structure (DSSP)

TT


S

S
TT




SS
T




S
 .........150.........160.........170.........180.........190.........200.........210
Sequence VIVVQDWFTDLSLYRFLQTAEMVKPSTEYYPHLVFLQNKARREDFCPRKLRQMHLMIDQLMAHSHLRYKG
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Known secondary structure (DSSP) SSS

TTTS






B

GGGGSSTT

SB
BS
 .........220.........230.........240.........250.........260.........270.........280
Sequence TLSMLQCNVFPGLPPDFLDSEVNLFLVPFMDPLFSLLPGYRGHPSFQSLVSKLRSQVMSMARPQLSHTIL
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Known secondary structure (DSSP) S
BTTTTTSSTT

GGG
SS
BS




STT





S

T




SSSS

 .........290.........300.........
Sequence TEKNWFHYAARIWDGVRKSSALAEYSRLL
Predicted secondary structure



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Known secondary structure (DSSP) BT
S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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