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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6sqgE_

Fold library idPDB HeaderMoleculeTitle
c6sqgE_1.90PDB header: membrane proteinChain: E: PDB Molecule: viral rhodopsin olpvrii;


Added to library: Sat Nov 9 08:22:59 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MSDLIEYSFYLTYAFLMTTGTITFIEALRTKNESVRHILNLETCISVVAAFFYSNFIGKLEHINYEEINL
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Known secondary structure (DSSP)
TT
S
T
TT

 .........80.........90.........100.........110.........120.........130.........140
Sequence NRYVDWAITTPIMLLVLVLAFRVNQTNKAMVKFSDFMIILGMNYGMLGTGYLGDIGVIHKTMGTVLGFLF
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Known secondary structure (DSSP) S




TTSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence FGGLFYKLNTLRTSNASNDLLYGAFFVLWALYGVFYQMEQLPRNVGYNVLDLFSKCFVGIYFWAFYAKIF
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Known secondary structure (DSSP) T


STTS
TT

 ..
Sequence TL
Predicted secondary structure

SS confidence

Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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