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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6sc2B_

Fold library idPDB HeaderMoleculeTitle
c6sc2B_3.90PDB header: motor proteinChain: B: PDB Molecule: o6-alkylguanine-dna alkyltransferase mutant,dync2h1 variant


Added to library: Sat Sep 7 09:51:34 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KLFIFTTTQNYFGLMSELWDQPLLCNCLEINNFLDDGNQMLLRVQRSDAGISFSNTIEFGDTKDKVLVFF
Predicted secondary structure















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Known secondary structure (DSSP)

S
SS


S


STT
TT

TTSS




SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence KLRPEVITDENLHDNILVSSMLESPISSLYQAVRQVFAPMLLKDQEWSRNFDPKLQNLLSELEAGLGIVL
Predicted secondary structure



























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Known secondary structure (DSSP) SSSS

SSS
TTSSS
TTTS

TT

S
 .........150.........160.........170.........180.........190.........200.........210
Sequence RRSKERANYFKELFETIAREFYNLDSLSLLEVVDLVETTQDVVDDVWRQTEHDHYPESRMLHLLDIIGGS
Predicted secondary structure













SS confidence





































































Known secondary structure (DSSP) T

TTTTS
TSSSSSS


 .........220.........230.........240.........250.........260.........270.........280
Sequence FGRFVQKKLGTLNLWEDPYYLVKESLKAGISICEQWVIVCNHLTGQVWQRYVPHPWKNEKYFPETLDKLG
Predicted secondary structure























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Known secondary structure (DSSP) TT
TTSS
TS

S

S





 .........290.........300.........310.........320.........330.........340.........350
Sequence KRLEEVLAIRTIHEKFLYFLPASEEKIICLTRVFEPFTGLNPVQYNPYTEPLWKAAVSQYEKIIAPAEQK
Predicted secondary structure












SS confidence





































































Known secondary structure (DSSP) TTTTSTTS
SS

GGG
 .........360.........370.........380.........390.........400.........410.........420
Sequence IAGKLKNYISEIQDSPQQLLQAFLKYKELVKRPTISKELMLERETLLARLVDSIKDFRLDFENRCRGIPG
Predicted secondary structure







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Known secondary structure (DSSP) TS
S
TTSTTTTT

S
 .........430.........440.........450.........460.........470.........480.........490
Sequence DASGPLSGKNLSEVVNSIVWVRQLELKVDDTIKIAEALLSDLPGFRCFHQSAKDLLDQLKLYEQEQFDDW
Predicted secondary structure











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Known secondary structure (DSSP)


GGGGT
T
S
 .........500.........510.........520.........530.........540.........550.........560
Sequence SRDIQSGLSDSRSGLCIEASSRIMELDSNDGLLKVHYSDRLVILLREVRQLSALGFVIPAKIQQVANIAQ
Predicted secondary structure
























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Known secondary structure (DSSP) TTTT





BTTTSTTS

B


TTT



 .........570.........580.........590.........600.........610.........620.........630
Sequence KFCKQAIILKQVAHFYNSIDQQMIQSQRPMMLQSALAFEQIIKNSKAGSGGKSQITWDNPKELEGYIQKL
Predicted secondary structure













SS confidence





































































Known secondary structure (DSSP) GGGT

TTTT
T
 .........640.........650.........660.........670.........680.........690.........700
Sequence QNAAERLATENRKLRKWHTTFCEKVVVLMNIDLLRQQQRWKDGLQELRTGLATVEAQGFQASDMHAWKQH
Predicted secondary structure







SS confidence





































































Known secondary structure (DSSP) TT

TTT

 .........710.........720.........730.........740.........750.........760.........770
Sequence WNHQLYKALEHQYQMGLEALNENLPEINIDLTYKQGRLQFRPPFEEIRAKYYREMKRFIGIPNQFKGVGE
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Known secondary structure (DSSP) TGGGS

TTS
TSTTS

STTT
 .........780.........790.........800.........810.........820.........830.........840
Sequence AGDESIFSIMIDRNASGFLTIFSKAEDLFRRLSAVLHQHKEWIVIGQVDMEALVEKHLFTVHDWEKNFKA
Predicted secondary structure

















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Known secondary structure (DSSP) TS
TTTTS
SS





S
 .........850.........860.........870.........880.........890.........900.........910
Sequence LKIKGKEVERLPSAVKVDCLNINCNPVKTVIDDLIQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Predicted secondary structure














SS confidence





































































Known secondary structure (DSSP) TT

S
SS
 .........920.........930.........940.........950.........960.........970.........980
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Predicted secondary structure
SS confidence





































































Known secondary structure (DSSP) TS

GGGTTTT
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Predicted secondary structure
SS confidence





































































Known secondary structure (DSSP)



 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Predicted secondary structure
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Known secondary structure (DSSP) TSBTTSTTTTS


ST
 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Predicted secondary structure
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Known secondary structure (DSSP) TTSTT

TT
GGGG
GGG
BGGGGG
STTTGGGT
 .........1200.........1210.........1220.........1230.........1240.........1250.........1260
Sequence XXXXXXXXXXXXTLIDYEDSQSRTMKLIKDWKDIVNQVGDNRCLLQSLKDSPYYKGFEDKVSIWERKLAE
Predicted secondary structure




















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Known secondary structure (DSSP)
SSS





SSS




TTSGGGGGT
 .........1270.........1280.........1290.........1300.........1310.........1320.........1330
Sequence LDEYLQNLNHIQRKWVYLEPIFGRGALPKEQTRFNRVDEDFRSIMTDIKKDNRVTTLTTHAGIRNSLLTI
Predicted secondary structure











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Known secondary structure (DSSP) S




GGGTTSSS
 .........1340.........1350.........1360.........1370.........1380.........1390.........1400
Sequence LDQLQRCQRSLNEFLEEKRSAFPRFYFIGDDDLLEILGQSTNPSVIQSHLKKLFAGINSVCFDEKSKHIT
Predicted secondary structure




















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Known secondary structure (DSSP) SGGGGSS

SS
STTTSSS


B


TTSS
 .........1410.........1420.........1430.........1440.........1450.........1460.........1470
Sequence AMKSLEGEVVPFKNKVPLSNNVETWLNDLALEMKKTLEQLLKECVTTGRSSQGAVDPSLFPSQILCLAEQ
Predicted secondary structure
















SS confidence





































































Known secondary structure (DSSP)

SS




SSSTSSS



TTTS
 .........1480.........1490.........1500.........1510.........1520.........1530.........1540
Sequence IKFTEDVENAIKDHSLHQIETQLVNKLEQYTNIDTSSEDPGNTESGILELKLKALILDIIHNIDVVKQLN
Predicted secondary structure








SS confidence





































































Known secondary structure (DSSP)


TT
S
SS


S
 .........1550.........1560.........1570.........1580.........1590.........1600.........1610
Sequence QIQVHTTEDWAWKKQLRFYMKSDHTCCVQMVDSEFQYTYEYQGNASKLVYTPLTDKCYLTLTQAMKMGLG
Predicted secondary structure



























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Known secondary structure (DSSP) T

STTSTS

TTS

SS
B








S






TTT

 .........1620.........1630.........1640.........1650.........1660.........1670.........1680
Sequence GNPYGPAGTGKTESVKALGGLLGRQVLVFNCDEGIDVKSMGRIFVGLVKCGAWGCFDEFNRLEESVLSAV
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Known secondary structure (DSSP)

SSSSST





TT

T


SSS
 .........1690.........1700.........1710.........1720.........1730.........1740.........1750
Sequence SMQIQTIQDALKNHRTVCELLGKEVEVNSNSGIFITMNPAGKGYGGRQKLPDNLKQLFRPVAMSHPDNEL
Predicted secondary structure




























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Known secondary structure (DSSP) TT
SB

SSSS

B

TT






SSS
S




TTS





S
 .........1760.........1770.........1780.........1790.........1800.........1810.........1820
Sequence IAEVILYSEGFKDAKVLSRKLVAIFNLSRELLTPQQHYDWGLRALKTVLRGSGNLLRQLNKSGTTQNANE
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Known secondary structure (DSSP) TT
S
S


TT


SSS


S
 .........1830.........1840.........1850.........1860.........1870.........1880.........1890
Sequence SHIVVQALRLNTMSKFTFTDCTRFDALIKDVFPGIELKEVEYDELSAALKQVFEEANYEIIPNQIKKALE
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Known secondary structure (DSSP) TTT

SSS








TT



 .........1900.........1910.........1920.........1930.........1940.........1950.........1960
Sequence LYEQLCQRMGVVIVGPSGAGKSTLWRMLRAALCKTGKVVKQYTMNPKAMPRYQLLGHIDMDTREWSDGVL
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Known secondary structure (DSSP)
S


TTSSSSTTSS


TTTS
T
TTTT

 .........1970.........1980.........1990.........2000.........2010.........2020.........2030
Sequence TNSARQVVREPQDVSSWIICDGDIDPEWIESLNSVLDDNRLLTMPSGERIQFGPNVNFVFETHDLSCASP
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Known secondary structure (DSSP) S
SS


S


GGGTTTSSSS

TTS


S


S

TT

 .........2040.........2050.........2060.........2070.........2080.........2090.........2100
Sequence ATISRMGMIFLSDEETDLNSLIKSWLRNQPAEYRNNLENWIGDYFEKALQWVLKQNDYVVETSLVGTVMN
Predicted secondary structure










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Known secondary structure (DSSP) TTS


SSS

STS
SSS


SS


 .........2110.........2120.........2130.........2140.........2150.........2160.........2170
Sequence GLSHLHGCRDHDEFIINLIRGLGGNLNMKSRLEFTKEVFHWARESPPDFHKPMDTYYDSTRGRLATYVLK
Predicted secondary structure



























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Known secondary structure (DSSP) TT
TT

STTSS
TSS


S

SSTT




TTT







B
 .........2180.........2190.........2200.........2210.........2220.........2230.........2240
Sequence KPEDLTADDFSNGLTLPVIQTPDMQRGLDYFKPWLSSDTKQPFILVGPEGCGKGMLLRYAFSQLRSTQIA
Predicted secondary structure
































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Known secondary structure (DSSP)





SSTTSSSSS



B
TTTSSTT




SSSST
SS
 .........2250.........2260.........2270.........2280.........2290.........2300.........2310
Sequence TVHCSAQTTSRHLLQKLSQTCMVISTNTGRVYRPKDCERLVLYLKDINLPKLDKWGTSTLVAFLQQVLTY
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Known secondary structure (DSSP)


TT

TS

SSS
TT
S

SSSS


SSS

 .........2320.........2330.........2340.........2350.........2360.........2370.........2380
Sequence QGFYDENLEWVGLENIQIVASMSAGGRLGRHKLTTRFTSIVRLCSIDYPEREQLQTIYGAYLEPVLHKNL
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Known secondary structure (DSSP) STTT
S

S
STT




S




TTSS
 .........2390.........2400.........2410.........2420.........2430.........2440.........2450
Sequence KNHSIWGSSSKIYLLAGSMVQVYEQVRAKFTVDDYSHYFFTPCILTQWVLGLFRYDLEGGSSNHPLDYVL
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Known secondary structure (DSSP) TTSSSS
ST

TTT
TT



TGGGSB



SS



 .........2460.........2470.........2480.........2490.........2500.........2510.........2520
Sequence EIVAYEARRLFRDKIVGAKELHLFDIILTSVFQGDWGSDILDNMSDSFYVTWGARHNSGAPGQPLPPHGK
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Known secondary structure (DSSP) GGG

SSSS
SS
S
TT


BSSS
TT






S

TT
S
 .........2530.........2540.........2550.........2560.........2570.........2580.........2590
Sequence PLGKLNSTDLKDVIKKGLIHYGRDNQNLDILLFHEVLEYMSRIDRVLSFPGGSLLLAGRSGVGRRTITSL
Predicted secondary structure





















SS confidence





































































Known secondary structure (DSSP)
BB


SS







TSTT


SSS
S
 .........2600.........2610.........2620.........2630.........2640.........2650.........2660
Sequence VSHMHGAVLFSPKISRGYELKQFKNDLKHVLQLAGIEAQQVVLLLEDYQFVHPTFLEMINSLLSSGEVPG
Predicted secondary structure


























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Known secondary structure (DSSP) TT





SS

SS


GGG

STTTS

TT
 .........2670.........2680.........2690.........2700.........2710.........2720.........2730
Sequence LYTLEELEPLLLPLKDQASQDGFFGPVFNYFTYRIQQNLHIVLIMDSANSNFMINCESNPALHKKCQVLW
Predicted secondary structure















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Known secondary structure (DSSP)
S
STTTGGG


S
STT
GGGTS
GGGGTTS
 .........2740.........2750.........2760.........2770.........2780.........2790.........2800
Sequence MEGWSNSSMKKIPEMLFSEVDPDFLKSFLLIHESCKAYGATPSQYMTFLHVYSAISSSKKKELLKRQSHL
Predicted secondary structure







SS confidence





































































Known secondary structure (DSSP)




TT


GGG


 .........2810.........2820.........2830.........2840.........2850.........2860.........2870
Sequence QAGVSKLNEAKALVDELNRKAGEQSVLLETIKAAEVLINQLDREHKRWNAQVVEITEELATLPKRAQLAA
Predicted secondary structure
SS confidence





































































Known secondary structure (DSSP) TT


STTTS
 .........2880.........2890.........2900.........2910.........2920.........2930.........2940
Sequence AFITYLSAAPESLRKTCLEEWTKSAGLEKFDLRRFLCTESEQLIWKSEGLPSDDLSIENALVILQSRVCP
Predicted secondary structure




























SS confidence





































































Known secondary structure (DSSP) TTSS
T

S

S

TTT


STT

SS
 .........2950.........2960.........2970.........2980.........2990.........3000.........3010
Sequence FLIDPSSQATEWLKTHLKDSRLEVINQQDSNFITALELAVRFGKTLIIQEMDGVEPVLYPLLRRDLVAQG
Predicted secondary structure
















SS confidence





































































Known secondary structure (DSSP)
SSTT
SS

SS
TTTT

S

STTTT

T
 .........3020.........3030.........3040.........3050.........3060.........3070.........3080
Sequence PRYVVQIGDKIIDYNEEFRLFLSTRNPNPFIPPDAASIVTEVNFTTTRSGLRGQLLALTIQHEKPDLEEQ
Predicted secondary structure




















SS confidence





































































Known secondary structure (DSSP) TTT

TT
S
SSS


SSTTSS




 .........3090.........3100.........3110.........3120.........3130.........3140.........3150
Sequence KTKLLQQEEDKKIQLAKLEESLLETLATSQGNILENKDLIESLNQTKASSALIQESLKESYKLQISLDQE
Predicted secondary structure








SS confidence





































































Known secondary structure (DSSP) GGGSSSS
TTTST
 .........3160.........3170.........3180.........3190.........3200.........3210.........3220
Sequence RDAYLPLAESASKMYFIISDLSKINNMYRFSLAAFLRLFQRALQNKQDSENTEQRIQSLISSLQHMVYEY
Predicted secondary structure











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Known secondary structure (DSSP) TTSTTTTTSTT



STT


S
S
 .........3230.........3240.........3250.........3260.........3270.........3280.........3290
Sequence ICRCLFKADQLMFALHFVRGMHPELFQENEWDTFTGVDQLPSWIDQERSWAVATLKIALPSLYQTLCFED
Predicted secondary structure















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Known secondary structure (DSSP) TTS
TTS
TTSS
SS
TT


S

SS


TT
 .........3300.........3310.........3320.........3330.........3340.........3350.........3360
Sequence AALWRTYYNNSMCEQEFPSILAKKVSLFQQILVVQVLRPDRLQSAMALFACKTLGLKEVSPLPLNLKRLY
Predicted secondary structure




















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Known secondary structure (DSSP)
STT
SSTTS


GGGTTTS

SSS

S
SS




TTTTT
 .........3370.........3380.........3390.........3400.........3410.........3420.........3430
Sequence KETLEIEPILIIISPGADPSQELQELANAERSGECYHQVAMGQGQADLAIQMLKECARNGDWLCLKNLHL
Predicted secondary structure

























SS confidence





































































Known secondary structure (DSSP) TT

TTS


TT




S





TT




TTT
 .........3440.........3450.........3460.........3470.........3480.........3490.........3500
Sequence VVSWLPVLEKELNTLQPKDTFRLWLTAEVHPNFTPILLQSSLKITYESPPGLKKNLMRTYESWTPEQISK
Predicted secondary structure


























SS confidence





































































Known secondary structure (DSSP)
TTT



SS




SS

TS



SSS


 .........3510.........3520.........3530.........3540.........3550.........3560.........3570
Sequence KDNTHRAHALFSLAWFHAACQERRNYIPQGWTKFYEFSLSDLRAGYNIIDRLFDGAKDVQWEFVHGLLEN
Predicted secondary structure




















SS confidence





































































Known secondary structure (DSSP) SS
GGGSTTTT
SS




SSSS


 .........3580.........3590.........3600.........3610.........3620.........3630.........3640
Sequence AIYGGRIDNYFDLRVLQSYLKQFFIFPYSVSLPQSCSILDYRAVIEKIPEDDKPSFFGLPANIARSSQRM
Predicted secondary structure



































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Known secondary structure (DSSP) TTGGG

ST



TTT



SS
S
SS

GGGTT

S
 .........3650.........3660.........3670.........3680.........3690.........3700.........3710
Sequence ISSQVISQLRILGRDREIWSNELSPVLNLWKKLNQNSNLIHQKVPPPNDRQGSPILSFIILEQFNAIRLV
Predicted secondary structure





















SS confidence





































































Known secondary structure (DSSP) TT

TTSSSSS
TTTTT








SSTT
 .........3720.........3730.........3740.........3750.........3760.........3770.........3780
Sequence QSVHQSLAALSKVIRGTTLLSSEVQKLASALLNQKCPLAWQSKWEGPEDPLQYLRGLVARALAIQNWVDK
Predicted secondary structure



















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Known secondary structure (DSSP) TTSSS



STT






SS
 .........3790.........3800.........3810.........3820.........3830.........3840.........3850
Sequence AEKQALLSETLDLSELFHPDTFLNALRQETARAVGRSVDSLKFVASWKGRLQEAKLQIKISGLLLEGCSF
Predicted secondary structure
































SS confidence





































































Known secondary structure (DSSP) TTS
TTTS
GGG
SSTS
GGGSSS

SSSS



SS
 .........3860.........3870.........3880.........3890.........3900.........3910.........3920
Sequence DGNQLSENQLDSPSVSSVLPCFMGWIPQDACGPYSPDECISLPVYTSAERDRVVTNIDVPCGGNQDQWIQ
Predicted secondary structure









































SS confidence





































































Known secondary structure (DSSP) TT


TT

S



TTS

SS
GGG
BSSTT







S

 .........3930
Sequence CGAALFLKNQ
Predicted secondary structure


SS confidence









Known secondary structure (DSSP) TT
S



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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