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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6sauA_

Fold library idPDB HeaderMoleculeTitle
c6sauA_1.35PDB header: hydrolaseChain: A: PDB Molecule: alpha amylase;


Added to library: Sat Oct 26 08:42:36 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ADTNSWKSRTIYFALTDRVARSASDNGGDGCGQLQDYCGGTFKGLEGKLDYIKGMGFDAIWITPVVQNSA
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Known secondary structure (DSSP)

TT


GGGT
SSTT



S

S
TTS




TTTTT




ST
 .........80.........90.........100.........110.........120.........130.........140
Sequence RGYHGYWASNLYATNSHYGTSDELKGLVNAAHGKGIYIMVDVVANHVGNGPLNEMQPAPLNQGSSYHPAC
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Known secondary structure (DSSP) T
TTS
S
TTT

TT


SB

SS
GGG
BSTTTTSGGGB



 .........150.........160.........170.........180.........190.........200.........210
Sequence GINYNDQHSIETCRVASDLPDLDTTDPKIRTLYKDWIKWLMSTYKFDGVRIDTVKHVEKDFWPDFAWASG
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Known secondary structure (DSSP) B

TT
SBSSTTS
BB
TTS

SS
GGGS
GGG
 .........220.........230.........240.........250.........260.........270.........280
Sequence SYTIGEVFSGDPNYVAGYSKLMGGLLNYPVYFPLNRFYQQQNSSQALVDMHNQIGSLVPDPTTLGTFLDN
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Known secondary structure (DSSP) S




S
TTTTSSSB
TTSS
TSS
GGGS
S

 .........290.........300.........310.........320.........330.........340.........350
Sequence HDNPRFLSQKNDVSLFKNALTYVLLARGIPIVYYGSEQAYAGGGDPQNREDLWRSRFNTNSDMYKFFQAL
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Known secondary structure (DSSP) TTS




SSSTTGGGT



STTTT


SGGGTT
TTS
 .........360.........370.........380.........390.........400.........410.........420
Sequence GGVRKSHGGLPGNDHVHLFVESDAYAWSRQDGAVMALTSNIGKGQQRQFCFFTQKNNKTWRGIFDGKTYT
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Known secondary structure (DSSP) TTT

SS

TTTTTT
S
TT


S
TT
TTT

 .........430.........440.
Sequence SGGDGKLCATVNNGEPIVFVA
Predicted secondary structure








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Known secondary structure (DSSP)

TT

TT



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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