Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6saoA_

Fold library idPDB HeaderMoleculeTitle
c6saoA_1.20PDB header: hydrolaseChain: A: PDB Molecule: amylase;


Added to library: Sat Oct 26 08:49:03 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AAAADWKSRSIYQLVTDRFGRSDGSTSACGDLSNYCGGDYKGIQNQLDYIAGMGFDAIWISPIPENTDGG
Predicted secondary structure












































SS confidence





































































Known secondary structure (DSSP)

TT





TT





S
TTS




TTTT




B
B
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence YHGYWAKDFEKLNTNFGSADDLKALVTAAHGKGMYVMLDVVANHAGPASGGDYSGFTFSSASNYHPQCTI
Predicted secondary structure


















































SS confidence





































































Known secondary structure (DSSP) TTS
SBS
TTSB
GGG

TT


SB



GGG

TT
SS
SGGGB



B
 .........150.........160.........170.........180.........190.........200.........210
Sequence DYDNQTSVEQCWVADDLPDINTEDDTIVSKLHSIVSDWVTTYDFDGIRIDTVKHIRKDFWSGYEEAAGVF
Predicted secondary structure






























SS confidence





































































Known secondary structure (DSSP)
TTSSBGGGTS
BB
TTST
SS
GGGS
TTTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence ATGEVFDGDAAYVGPYQDQLSSLINYPLYYAIRDVFSAGSGFSRISDMLSTIKSNFKDPSVLTTFVDNQD
Predicted secondary structure
































SS confidence





































































Known secondary structure (DSSP)



S
GGGGGTSSB



T
S
GGGS
S

TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence NARFLSVKSDMSLYKNALAFTILTEGIPVVYYGTEQGFKGGDDPKNREVLWTSNYDTSSDLYKFIKIVNN
Predicted secondary structure





































SS confidence





































































Known secondary structure (DSSP) S




SSSTTGGGT



STTTTS

SGGGTT
TTST
 .........360.........370.........380.........390.........400.........410.........420
Sequence DVRQKSDKTVTLDVDVGTNTYAFTHGKNLIVVNNYGSGSTESVTVKVGDSVADGTKLVDAVSNITATVSG
Predicted secondary structure




























SS confidence





































































Known secondary structure (DSSP) TTS

SS


SSTT
S
TT




TTS
TT
TTT


BT
 .........430........
Sequence GSITFSLKDGLPALFVPS
Predicted secondary structure




SS confidence

















Known secondary structure (DSSP) T
STT



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D