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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6s67D_

Fold library idPDB HeaderMoleculeTitle
c6s67D_2.47PDB header: fluorescent proteinChain: D: PDB Molecule: aequorea cf. australis fluorescent protein 1 (aausfp1);


Added to library: Sat Jul 25 08:23:58 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LFREKIPYVVEMEGDVEGMKFSVRGKGHGDANTGKIEASFICTTGELPVPWSSILTTVAQCFAKYPNDIK
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Known secondary structure (DSSP)

SS
TTTTTTTTSS
SS
TGGGTTT

GGGSB

TTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence DYPKSAMPEGYVQERTITFENDGVYKTRAEVTYEKGSVYNRVTLNGSGFKKGGNILGKKLEFNYNPHCIY
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Known secondary structure (DSSP)
TTTT
TTS
TTS

TTSTTTTT
B
S



 .........150.........160.........170.........180.........190.........200.........210
Sequence VLPDVQNNGIKCYINIVHDVIGGGQIIAAHQQLNTPLGGGPVDIPHYHHIQAHTILSKDPKETRDHMNVV
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Known secondary structure (DSSP) GGGTBTTS
SSSS





S

TT

SS
 .........220...
Sequence EVFRAIDCKTAYA
Predicted secondary structure








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Known secondary structure (DSSP)
T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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