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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6rthB_

Fold library idPDB HeaderMoleculeTitle
c6rthB_3.40PDB header: toxinChain: B: PDB Molecule: rtx toxin and ca2+-binding protein;


Added to library: Sat Mar 21 08:45:58 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NNFITHNLHTVWIGGPLPDITKSYLKVWRDINPDYTHITWIDTDNKFVALYNNAVKELREYTLKQYLVGD
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Known secondary structure (DSSP)

B

S

SS



TTS
SS
SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence SNATANDYYDQAVQIERGVRENVYLPHGNDIERIKTIKKIAGSLGDNKVQEYRTKIETIESSFVEMIDGG
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Known secondary structure (DSSP)
S


TTS

SSS
TTT

 .........150.........160.........170.........180.........190.........200.........210
Sequence HYQHVSALFEQFSEMDNLRATALKQIYEREINDRGNLAAASDILRLVALQTQGGVYIDTDLLPHIDWDLI
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Known secondary structure (DSSP)

TTT

T

TT

B
 .........220.........230.........240.........250.........260.........270.........280
Sequence ESTKLFLMNDNNSVERVYSKEIYLEIEKYKQLTGSKTNKIRSGLTKSQINEIQRLTEENNLFKHLNELEK
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Known secondary structure (DSSP)

S


TTS
T
TT
GGGSB

S

T
SB





BS
 .........290.........300.........310.........320.........330.........340.........350
Sequence NCFYSDNSGWTNAMLACNENNGFMNALMDRIILNYTILDEFIISNDGEMLNFTEKMSAQFGLNAEHGSFI
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Known secondary structure (DSSP) S



SS



TTT

S


T
 .........360.........370.........380.........390.........400.........410.........420
Sequence PSLANYYKDSIVPNSPQATATLFMTGPTVLDTVIRVEEAVRRGIVKKEAIASLYTVEETFSSWSISQFYD
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Known secondary structure (DSSP) GGGTTTTTTS


STT
TSTTTS


S
STTT



SS
S
 .........430.........440.........450.........460.........470.........480.........490
Sequence KAAFYLDKVKFDISLNSAEEGILRDSCFDVIQQSEQATHLPDIAIKFLESLNNFTWKQLELLIKASEFSD
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Known secondary structure (DSSP) STT
















BG
 ......
Sequence QYKTLA
Predicted secondary structure

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Known secondary structure (DSSP) GGGTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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