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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6reyc_

Fold library idPDB HeaderMoleculeTitle
c6reyc_3.00PDB header: hydrolaseChain: C: PDB Molecule: proteasome subunit alpha type-4;


Added to library: Sat Sep 7 08:35:24 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence FVPQKEIVYNKLLPYAERLDAESDLQLAQIKCNLGRAVQLQELWPGGLFWTRKLSTYIRLYGRKFSKEDH
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Known secondary structure (DSSP)



S


STTTSTTGGGTTTT

SS
S
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence VLFIKLLYELVSIPKLEISMMQGFARLLINLLKKKELLSRADLELPWRPLYDMVERILYSKTEHLGLNWF
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Known secondary structure (DSSP) TSTT

TTS
GGGS
STT



SS
SSSSSSS


 .........150.........160.........170.........180.........190.........200.........210
Sequence PNSVENILKTLVKSCRPYFPADATAEMLEEWRPLMCPFDVTMQKAITYFEIFLPTSLPPELHHKGFKLWF
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Known secondary structure (DSSP)
TTGGGS
TTSSTTTTTTSGGG

TTSTT





GGGGGGTGGGT
 .........220.........230.........240.........250.........260.........270.........280
Sequence DELIGLWVSVQNLPQWEGQLVNLFARLATDNIGYIDWDPYVPKIFTRILRSLNLPVGSSQVLVPRFLTNA
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Known secondary structure (DSSP) TT

S

TTSTTT


TTTTT



SSS

S

GGGGS
 .........290.........300.........310.........320.........330.........340.........350
Sequence YDIGHAVIWITAMMGGPSKLVQKHLAGLFNSITSFYHPSNNGRWLNKLMKLLQRLPNSVVRRLHRERYKK
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Known secondary structure (DSSP)

TTTT
SS
TTSGGGSSTTS
STTTS
 .........360.........370.........380.........390.........400.........410.........420
Sequence PSWLTPVPDSHKLTDQDVTDFVQCIIQPVLLAMFSKTGSLEAAQALQNLALMRPELVIPPVLERTYPALE
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Known secondary structure (DSSP)

SS



SSSS

TTTGGG
TT
S
STTTS
 .........430.........440.........450.........460.........470.........480.........490
Sequence TLTEPHQLTATLSCVIGVARSLVSGGRWFPEGPTHMLPLLMRALPGVDPNDFSKCMITFQFIATFSTLVP
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Known secondary structure (DSSP)
SS
TS

SS
TTTGGGTTGGG

TTTSTTTS
 .........500.........510.........520.........530.........540.........550.........560
Sequence LVDCSSVLQERNDLTEVERELCSATAEFEDFVLQFMDRCFGLIESSTLEQTREETETEKMTHLESLVELG
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Known secondary structure (DSSP) B


SSSSSS
TT

GGGGGSTS





SS






 .........570.........580.........590.........600.........610.........620.........630
Sequence LSSTFSTILTQCSKEIFMVALQKVFNFSTSHIFETRVAGRMVADMCRAAVKCCPEESLKLFVPHCCSVIT
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Known secondary structure (DSSP) TTTTSB
TTS


TTTTT
TTS
 .........640.........650.........660.........670.........680.........690.........700
Sequence QLTMNDDVLNDEELDKELLWNLQLLSEITRVDGRKLLLYREQLVKILQRTLHLTCKQGYTLSCNLLHHLL
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Known secondary structure (DSSP) STTTT
SS
SS

TTTT

S
GGGGGGGTT
SSTT
 .........710.........720.........730.........740.........750.........760.........770
Sequence RSTTLIYPTEYCSVPGGFDKPPSEYFPIKDWGKPGDLWNLGIQWHVPSSEEVSFAFYLLDSFLQPELVKL
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Known secondary structure (DSSP) TT



S


SSTT
SSSSTTTS
GGGTTS



STT








TTTTTT
 .........780.........790.........800.........810.........820.........830.........840
Sequence QHCGDGKLEMSRDDILQSLTIVHNCLIGSGNLLPPLKGEPVTNLVPSMVSLEETKLYTGLEYDLSRENHR
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Known secondary structure (DSSP) TTSS


TTSGGGS







SSS


SS








S




SS

 .........850.........860.........870.........880.........890.........900.........910
Sequence EVIATVIRKLLNHILDNSEDDTKSLFLIIKIIGDLLQFQGSHKHEFDSRWKSFNLVKKSMENRLHGKKQH
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Known secondary structure (DSSP)
TT
TT
SSS
TTTTS

STT
GGG
 .........920.........930.........940.........950.........960.........970.........980
Sequence IRALLIDRVMLQHELRTLTVEGCEYKKIHQDMIRDLLRLSTSSYSQVRNKAQQTFFAALGAYNFCCRDII
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Known secondary structure (DSSP)
TS







TSSS
TTSTT
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence PLVLEFLRPDRQGVTQQQFKGALYCLLGNHSGVCLANLHDWDCIVQTWPAIVSSGLSQAMSLEKPSIVRL
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Known secondary structure (DSSP) GGGS
TT
S


S

SSS

TTS
SSSSS

TTS
 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence FDDLAEKIHRQYETIGLDFTIPKSCVEIAELLQQSKNPSINQILLSPEKIKEGIKRQQEKNADALRNYEN
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Known secondary structure (DSSP)




S




S

SS

SS







SS
 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence LVDTLLDGVEQRNLPWKFEHIGIGLLSLLLRDDRVLPLRAIRFFVENLNHDAIVVRKMAISAVAGILKQL
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Known secondary structure (DSSP) S
TT

GGGTT


SSS


TSS
SST
 .........1200.........1210.........1220.........1230.........1240.........1250.........1260
Sequence KRTHKKLTINPCEISGCPDRPDNHWLHYDSKTIPRTKKEWESSCFVEKTHWGYYTWPKNMVVYAGVEEQP
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Known secondary structure (DSSP)





TTTTTS



SS
GGGGGGS
SS


SS

SSS



STTTTSS


SS
SSS
S
 .........1270.........1280.........1290.........1300.........1310.........1320.........1330
Sequence KLGRSREDMTEAEQIIFDHFSDPKFVEQLITFLSLEDRKGKDKFNPRRFCLFKGIFRNFDDAFLPVLKPH
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Known secondary structure (DSSP)

S

SSSS
TTT

T
TS
S
SSS



SSSSGGGGS
 .........1340.........1350.........1360.........1370.........1380.........1390.........1400
Sequence LEHLVADSHESTQRCVAEIIAGLIRGSKHWTFEKVEKLWELLCPLLRTALSNITVETYNDWGACIATSCE
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Known secondary structure (DSSP) S



TT

S

TTTTTTTTTTTS
 .........1410.........1420.........1430.........1440.........1450.........1460.........1470
Sequence SRDPRKLHWLFELLLESPLSGEGGSFVDACRLYVLQGGLAQQEWRVPELLHRLLKYLEPKLTQVYKNVRE
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Known secondary structure (DSSP) S

TTT

TTT
SSS
SS
SS
SS
STSS

 .........1480.........1490.........1500.........1510.........1520.........1530.........1540
Sequence RIGSVLTYIFMIDVSLPNTTPTISPHVPEFTARILEKLKPLMTQGIKLLKTILKWLMASAGRSFSTAVTE
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Known secondary structure (DSSP) TSS



TT



SS

STTT

TTTTTSSSSS
S

TT
 .........1550.........1560.........1570.........1580.........1590.........1600.........1610
Sequence QLQLLPLFFKIAPVENDNSYDELKRDAKLCLSLMSQGLLYPHQVPLVLQVLKQTARSSSWHARYTVLTYL
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Known secondary structure (DSSP) TGGGTTS
SS

TTS
TS


TTSTTSS
 .........1620.........1630.........1640.........1650.........1660.........1670.........1680
Sequence QTMVFYNLFIFLNNEDAVKDIRWLVISLLEDEQLEVREMAATTLSGLLQCNFLTMDSPMQIHFEQLCKTK
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Known secondary structure (DSSP) TTTSSTTTTSTTTTTT
SSTTSS


S

 .........1690.........1700.........1710.........1720.........1730.........1740.........1750
Sequence LPKAELVKRHAGVLGLGACVLSSPYDVPTWMPQLLMNLSAHLNDPQPIEMTVKKTLSNFRRTHHDNWQEH
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Known secondary structure (DSSP)



TT
TT


TTTTTTTTS
TTSS
 .........1760.........1770...
Sequence KQQFTDDQLLVLTDLLVSPCYYA
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Known secondary structure (DSSP) GGGS
S




TTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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