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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6r3bA_

Fold library idPDB HeaderMoleculeTitle
c6r3bA_4.50PDB header: virusChain: A: PDB Molecule: major capsid protein;


Added to library: Sat Oct 26 08:24:51 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AYTKISDVIVPELFNPYVINTTTQLSAFFQSGIAATDDELNALAKKAGGGSTLNMPYWNDLDGDSQVLND
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Known secondary structure (DSSP)

S






STTTSS

SSS
SS

TSS

SSS





S









SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence TDDLVPQKINAGQDKAVLILRGNAWSSHDLAATLSGSDPMQAIGSRVAAYWAREMQKIVFAELAGVFSND
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Known secondary structure (DSSP) S



















B
SS
S
S

TTTSSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence DMKDNKLDISGTADGIYSAETFVDASYKLGDHESLLTAIGMHSATMASAVKQDLIEFVKDSQSGIRFPTY
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Known secondary structure (DSSP) SSSGGG


SS



STTTSSS

S


S

B



SSSS



BS
 .........220.........230.........240.........250.........260.........270.........280
Sequence MNKRVIVDDSMPVETLEDGTKVFTSYLFGAGALGYAEGQPEVPTETARNALGSQDILINRKHFVLHPRGV
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Known secondary structure (DSSP) SSSS





BTTTB



B


S





S





SSSS

B



SSS
 .........290.........300.........310.........320...
Sequence KFTENAMAGTTPTDEELANGANWQRVYDPKKIRIVQFKHRLQA
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Known secondary structure (DSSP) B



S


SSS

SSTTTSS

B

S
SSS


B




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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