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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6qxmE_

Fold library idPDB HeaderMoleculeTitle
c6qxmE_4.10PDB header: viral proteinChain: E: PDB Molecule: portal protein;


Added to library: Sat Sep 7 08:17:29 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AKSVYERLKNDRAPYETRAQNCAQYTIPSLFPKYQTPWQAVGARGLNNLASKLMLALFPMQTWMRAKVDE
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Known secondary structure (DSSP)
GGGTTTT
SSS






SS


SS





ST
 .........80.........90.........100.........110.........120.........130.........140
Sequence GLSMVERIIMNYIESNSYRVTLFEALKQLVVAGNVLLYLPEPEGSNYNPMKLYRLSSYVVQRDAFGNVLQ
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Known secondary structure (DSSP) TTTTTS






SSS





TTS
SSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence MVTRDQIAFGALPEDIRKAVEGQGGEKKADETIDVYTHIYLDEDSGEYLRYEEVEGMEVQGSDGTYPKEA
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Known secondary structure (DSSP)
SSSS
TTSTTTS



TT


SS
SSTT
TT


SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence CPYIPIRMVRLDGESYGRSYIEEYLGDLRSLENLQEAIVKMSMISSKVIGLVNPAGITQPRRLTKAQTGD
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Known secondary structure (DSSP)
S


SB

TTSSS
B
STTTSS


B

SSSS

S

TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence FVTGRPEDISFLQLEKQADFTVAKAVSDAIEARLSFAFMLNSAVQRTGERVTAEEIRYVASELEDTLGGV
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Known secondary structure (DSSP)




TTT
B





STS
S




S

SS
SSST
 .........360.........370.........380.........390..
Sequence YSILSQELQLPLVRVLLKQLQATQQIPELPKEAVEPTISTGL
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Known secondary structure (DSSP) TTTTTSTTTS

S



STTSS







Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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