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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6pw4D_

Fold library idPDB HeaderMoleculeTitle
c6pw4D_3.53PDB header: transport proteinChain: D: PDB Molecule: trp-like ion channel;


Added to library: Sat Sep 28 09:33:14 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KKPSDYGCQLHYKHARVVEPESTTDDGMKRLKDVGDKGTLITAAELGLVDKYRDLKRAGQDILTCDWPYH
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Known secondary structure (DSSP)

S
SSS

S




SS


SSSSSGGGTS



TTTT
S

S



SSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence YSSILYACYGNQYKILQMVEREFVGSTQELTAMHTTRCWVGKNSAMVAAYQGHLETMLYIIDLDMQGKFT
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Known secondary structure (DSSP)

SSSSGGGTT
T

STTT


TT


TTTT
T

S
 .........150.........160.........170.........180.........190.........200.........210
Sequence EDLFKQRDVMGKNAMMWAASQGHTDTIEVLLVRSLYRLLPEDCADPLVLKTRWKLVSLLADLASHCRDYD
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Known secondary structure (DSSP) S
TTT


TTS

T
TTS
S



TT




SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence PGCSRSFFQEVLASIKYDPVEGARQEEAAAAGGGGSAREGAALHEPTWGVDDGELKDVHITVRTLQGVIV
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Known secondary structure (DSSP) SS



S
TTTGGGS


TTTTTTTGGGSS
SSSTTTTT














S

GGGT
 .........290.........300.........310.........320.........330.........340.........350
Sequence SAYRAGMNCMGVIMYCQSLLQQARYFDDLVAQLTAWEVKLLDTCRNKQEVQAILAPTEDDPSEPVGYALA
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Known secondary structure (DSSP) TTTS
TTSS
TT

SSTTTTTTSS

SSS


S
 .........360.........370.........380.........390.........400.........410.........420
Sequence TFDKAFLSHKFVQQIFTEKWDTMGVTDYTKSFPWHVPLYRWLLTQCALITFTVLLSYLVFSFDPSDPVPA
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Known secondary structure (DSSP) TT
TSTTTSS
TTTTT



SSSTTTS


SS
GGG
 .........430.........440.........450.........460.........470.........480.........490
Sequence SVAPLNTFLAVWCAAILVDEVQEYVEEGRAEYMSSGWNVMDVTMALSYILHYILRIIAVRVTDNLNILLV
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Known secondary structure (DSSP) GG
TT
TTSSTTGGGSS

SSSS
 .........500.........510.........520.........530.........540.........550.........560
Sequence VNDLLAAAALMAWFRMVSVFELSSAIGPLIQMMKQMLIKDVTRFALLVLVILLGFSVGMEALFQVTGVIF
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Known secondary structure (DSSP) GGGGGGGSSTTTSSTTTTT


TT
 .........570.........580.........590.........600.........610.........620.........630
Sequence YLIFAIVTAILLLNLFIAMLADTYTRVSTQAMVEFRYRKAKLMASYSRRDFVCPPFNLLHTVPLFSWYFP
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Known secondary structure (DSSP) SSSSSSSS

S

STTTS




S
TTSS
 .........640.........650.........660.........670.....
Sequence QGEEMRQVVVLQRRVVDDFLNSNRVALFREKLNAELPNLVHEMLK
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Known secondary structure (DSSP)
SSSTTTSTTGGGTSSTTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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