Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6pt9A_

Fold library idPDB HeaderMoleculeTitle
c6pt9A_1.66PDB header: hydrolaseChain: A: PDB Molecule: exo-2s-iota carrageenan s1 sulfatase;


Added to library: Sat Sep 28 09:17:44 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KPNVLILLFDDMRFDTFSYRNGPVSTPNIDALANEGTRFDQAMTSTGLSSPSRAAMFTGRWGHKTGLDDN
Predicted secondary structure






































SS confidence





































































Known secondary structure (DSSP)


SS

SS
BGGGT
SB

STT
S
SSSS
S

S
 .........80.........90.........100.........110.........120.........130.........140
Sequence VGLYHSRLSELSLSEGSVIKRATSIGYDVSYVGKWHLGAQGPALRGANFMWGHDKDEERNGRPFTPYQTQ
Predicted secondary structure

























































SS confidence





































































Known secondary structure (DSSP) BSBTT
SB



TT

TT


SSSTTTT

TTSS

SS


B

 .........150.........160.........170.........180.........190.........200.........210
Sequence KNVARMNAGERDKNGEKHDYYKTLPGTYADTVTAKEVNEGKLMLQNAAKSDKPFFGIVSFEQPHPPYRVP
Predicted secondary structure











































SS confidence





































































Known secondary structure (DSSP) TT


GGG
BTTTSS
GGGST
SS

TT
SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence EPYASMYDYKDIKLPKNFGIKRKHKPMAQDDIWWPWHDVSHMSETDWRKAHSFYYGAIAMIDHAVGELIN
Predicted secondary structure







































SS confidence





































































Known secondary structure (DSSP) TTTTTSS
GGG



TTBT



S

GGGTS
SSGGG

TT

 .........290.........300.........310.........320.........330.........340.........350
Sequence TAKEEGLYDDLHIILVGDQGSMLGEHNLYDKGPYAYDELMRMPLIIRDPSLEPKIINRQVSMLDIAPTLR
Predicted secondary structure








































SS confidence





































































Known secondary structure (DSSP) TT
GGG
S


SBTT


S


B


TTS


S
GGG
 .........360.........370.........380.........390.........400.........410.........420
Sequence QWMTLPLDGDEDGRSLLPLMKQGDSADAGKDDISLYAYEWYNGGWFGIRAIRTPEMKFVWNPGDSRDELY
Predicted secondary structure









































SS confidence





































































Known secondary structure (DSSP) T



S

SS

SGGGGGTTS


TT
SS
TTSS

 .........430.........440.........450.........460.........470..
Sequence DLKNDPYEITNQIDNPKYKKQLTDLVHKMAGELNRIDDPSLTKFNHHMKAFL
Predicted secondary structure




















SS confidence



















































Known secondary structure (DSSP) TTT
TT

S

TT
GGGTT
TTTTT
-


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D