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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6oycA_

Fold library idPDB HeaderMoleculeTitle
c6oycA_2.35PDB header: sugar binding proteinChain: A: PDB Molecule: glycosylation associate protein 1;


Added to library: Sat May 23 08:50:29 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MFHFIPSWYNENRTWYDNNYLWYFKPTNVGFDDTINQMKMFDYAGKESRLVVLNYMPNLRYYLHRYDLLE
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Known secondary structure (DSSP)





TTSTTS




TT


TTSS

TT


S

TTTT
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence SGYYSVFDDIQEIGNVRQQMIDFRQLNWPEGVDFTYTPFIVLVKKSGDLIAKVQFGEEGNLTHIDYFANE
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Known secondary structure (DSSP) S
TT

S






GGGS


TT

SS
TT
TTS
TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence QIAKKYLFDDRGFLSSILYYDNGGEAYQDYLAPSGERIMREYLREGDHHVEINPKKAIHFLKLSYSDIEE
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Known secondary structure (DSSP)
TTSSTT
TTS

BTTB


GGGGGG
S
SSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence LIREKYLTYLHKEVSKSDTIIVSFNQVHNAFIVGNTSKGNLILSVFSERNNAHNVLEDYSSLSRADAIIC
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Known secondary structure (DSSP)

TT


TTTTTT
TTS
TTT


T
S
 .........290.........300.........310.........320.........330.........340.........350
Sequence DRLDIAAQLKEKIDKPVVHVSPFDTRLALGKSNQVRDLEIYFVVDRLSHKELQKSLTSLYKVMLKNNDIK
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Known secondary structure (DSSP) S


S





TTS

SGGGG
S

TT

T
TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence VTFVSYEREFESRQLTYDYLKEATKVFDQKFFSLSEKTRLSFTHPLSETDIINRLEYVRLIIDISKIPDL
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Known secondary structure (DSSP)




TT

GGG





S


STTT



SSS

 .........430.........440.........450.........460.........470.........480.........490
Sequence YTQIAGISSGIPQINTILTEFVEHRKNGYIIEEIQELEKAIPYYCEQLTNWNRSLIYSIDKINDYTGGQL
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Known secondary structure (DSSP)


SS

TT

BTTT
SSGGGT
SS
 ........
Sequence VERIINSY
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Known secondary structure (DSSP) T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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