Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6o0fB_

Fold library idPDB HeaderMoleculeTitle
c6o0fB_2.12PDB header: antitoxinChain: B: PDB Molecule: saxiphilin;


Added to library: Sat Jul 13 08:22:25 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KQVRWCAISDLEQKKCNDLVGSCNVPDITLVCVLRSSTEDCMTAIKDGQADAMFLDSGEVYEASKDPYNL
Predicted secondary structure




























SS confidence





































































Known secondary structure (DSSP)
SS

BTTB
SSTTS

B
GGGTSTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence KPIIAEPYSSNRDLQKCLKERQQALAKKMIGHYIPQCDEKGNYQPQQCHGSTGHCWCVNAMGEKISGTNT
Predicted secondary structure






























































SS confidence





































































Known secondary structure (DSSP)



BTT
SSS

SS




B
TTS
B
STTTTB
TT

B
TT

B
 .........150.........160.........170.........180.........190.........200.........210
Sequence PPGQTRATCERHELPKCLKERQVAFVPQCDEKGNYEPQQFHGSTGYSWCVNAIGEEIAGTKTPPGKIPAT
Predicted secondary structure































































SS confidence





































































Known secondary structure (DSSP)
TTS








S
SS





B
TTS
B
S
TTT

B
TT

B
TT

B
TTS



 .........220.........230.........240.........250.........260.........270.........280
Sequence CQKHDLVTTCHYAVAMVKKSSAFQFNQLKGKRSCHSGVSKTDGWKALVTVLVEKKLLSWDGPAKESIQRA
Predicted secondary structure









































SS confidence





































































Known secondary structure (DSSP)


SS
TT



GGG
TT

S
SS
TTTTTT
S



TTTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence MSKFFSVSCIPGATQTNLCKQCKGEEGKNCKNSHDEPYYGNYGAFRCLKEDMGDVAFLRSTALSDEHSEV
Predicted secondary structure








































SS confidence





































































Known secondary structure (DSSP) SSS
TT
SSGGGGTT



TTTTT
SSTTSTT
TTS
SGGG

GGGGTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence YELLCPDNTRKPLNKYKECNLGTVPAGTVVTRKISDKTEDINNFLMEAQKRQCKLFSSAHGKDLMFDDST
Predicted secondary structure





































SS confidence





































































Known secondary structure (DSSP) TTT
GGGTTTS
S



TT
SSTT


S

SS
SSSSS
TT
 .........430.........440.........450.........460.........470.........480.........490
Sequence LQLALLSSEVDAFLYLGVKLFHAMKALTGDAHLPSKNKVRWCTINKLEKMKCDDWSAVSGGAIACTEASC
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP)




TT


TT





TT
SSTTTTS
SS
 .........500.........510.........520.........530.........540.........550.........560
Sequence PKGCVKQILKGEADAVKLEVQYMYEALMCGLLPAVEEYHNKDDFGPCKTPGSPYTDFGTLRAVALVKNKD
Predicted secondary structure



































SS confidence





































































Known secondary structure (DSSP) TS

B
TT


TT

STT


S








 .........570.........580.........590.........600.........610.........620.........630
Sequence INWNNIKGKKSCHTGVGDIAGWVIPVSLIRRQNDNSDIDSFFGESCAPGSDTKSNLCKLCIGDPKNSAAN
Predicted secondary structure













































SS confidence





































































Known secondary structure (DSSP)

GGG
TT

S
TT
TTTTTTS

SSSSSSSBB
SSS
TTSSBTSS


TT
TTSS
 .........640.........650.........660.........670.........680.........690.........700
Sequence TKCSLSDKEAYYGNQGAFRCLVEKGDVAFVPHTVVFENTDGKNPAVWAKNLKSEDFELLCLDGSRAPVSN
Predicted secondary structure

















































SS confidence





































































Known secondary structure (DSSP)
TT
SSTTSTT
T
STTTSSSS


SSSSS

GGG

TTS
TT
 .........710.........720.........730.........740.........750.........760.........770
Sequence YKSCKLSGIPPPAIVTREESISDVVRIVANQQSLYGRKGFEKDMFQLFSSNKGNNLLFNDNTQCLITFDR
Predicted secondary structure


































SS confidence





































































Known secondary structure (DSSP) TTTS
S




GGGSTT
TTTTT

SS

SS
SS
SS
TT




 .........780.........790.........800.........810......
Sequence QPKDIMEDYFGKPYYTTVYGASRSAMSSELISACTIKHCSNSLEVL
Predicted secondary structure























SS confidence













































Known secondary structure (DSSP)
SS

TT
TTS


TS


S



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D