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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6nf6A_

Fold library idPDB HeaderMoleculeTitle
c6nf6A_3.32PDB header: membrane proteinChain: A: PDB Molecule: otopetrin3;


Added to library: Sat Jun 8 08:18:07 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AQKSGQLFSGLLALNVVFLGSAFISSMIFNHVAITLADVWILLSILKVLCLCWIIYYLLGTSRQPHAVAP
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Known secondary structure (DSSP)

TTTS
TTTS




T
 .........80.........90.........100.........110.........120.........130.........140
Sequence VWIRGSLLLFGTFSILLNVFQIGYSVIQINCKSKVEIVFPSIEILFVATQAFFLWHHSKDCIQVQHNLTR
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Known secondary structure (DSSP) TTTT

S

SSTTSSS



S
 .........150.........160.........170.........180.........190.........200.........210
Sequence CGLMLTIATNLLLWLLAVTNDSIHMEIESQLRTTTCKVFQKGYILLYPFNTEYCLICCSVLYVMWKNVGR
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Known secondary structure (DSSP)

T


STTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence FGPLLGAAAVIIGICVFMMYQIQATGSAPNYQVFVLYYSYYIVLLPLMCVVAIIGTIIHTLEKPTRSLDV
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Known secondary structure (DSSP)
TTSS

S


 .........290.........300.........310.........320.........330.........340.........350
Sequence VLLMGAALGQIAMSYFSIVAIVATNPRDMLNSLILSYSVLLIFQYITQNIFIIDGLQWKRKALKEISFFL
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Known secondary structure (DSSP) S


STTT

 .........360.........370.........380.........390.........400.........410.
Sequence VLCNIILWIMPTFGAHPVFENGLQKSFYGYSTWFAIVNFGLPLSVFYRMHSVGGLLEVYVS
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Known secondary structure (DSSP) GGGSSS
TTTSSTTTTTTT
T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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