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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6nf4A_

Fold library idPDB HeaderMoleculeTitle
c6nf4A_2.98PDB header: membrane proteinChain: A: PDB Molecule: otopetrin1;


Added to library: Sat Jun 8 08:17:49 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KYPQKNAELLSAQYGTNLLLLGVSVMLALAAQSGPVKEEHLLSFITVLMLVQLVWMLCYMIRRERERSGA
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Known secondary structure (DSSP)


S
SSS

TT



 .........80.........90.........100.........110.........120.........130.........140
Sequence SWIRGGLTMLALLSLIMDAFRIGYFVGYHSCISAALGVYPIVHALHTISQVHFLWFHIKDVIKKYETFER
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Known secondary structure (DSSP) TSS


S
TSSSS





 .........150.........160.........170.........180.........190.........200.........210
Sequence FGVIHAVFTNLLLWCNGVMSETEHFMHTSVCSMFSTSLYYLYPFNIEYHIFVSAMLFVMWKNIGLLLGPL
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Known secondary structure (DSSP) TTT






 .........220.........230.........240.........250.........260.........270.........280
Sequence GGLVALASSVSVLVVYLIHLEKTEEMHEAAVSMFYYYGVAMMACMCVGSGTGLLVYRMENRPMDTGSNPA
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Known secondary structure (DSSP) S
STTS



S
S

 .........290.........300.........310.........320.........330.........340.........350
Sequence RTLDTELLLASSLGSWLMSWCSVVASVAEAGQKSPSFSWTSLTYSLLLVLEKCIQNLFIVESLYRPGRKR
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Known secondary structure (DSSP) TTT
S


ST

 .........360.........370.........380.........390.........400.........410.........420
Sequence QILKNICMFLFMCNISLWILPAFGCRPQYDNPLENETFGTSVWTTVLNVAIPLNLFYRMHSVASLFEVFR
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Known secondary structure (DSSP) TT

GGGG
TTTTTTS

 .
Sequence K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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