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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6m40A_

Fold library idPDB HeaderMoleculeTitle
c6m40A_2.89PDB header: viral proteinChain: A: PDB Molecule: ns3-like protein;


Added to library: Sat Apr 11 08:26:51 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AGVVLQLFSHPGAGKTRAIPEYVRQLXTWSNRVYVAGPTRVVAREXLESLQGTKWVCAXVKLARVVVTTH
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Known secondary structure (DSSP)




TT
TTTT
SSSTTSSSSS



S
 .........80.........90.........100.........110.........120.........130.........140
Sequence QTLLRYALTSGLLFAKDVSYVLDETHVDSAHTKVLRALIHQTVCKEKSKAACIEXTATEVRVSXDSNYPI
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Known secondary structure (DSSP) SS
TT
SS
TT
S
SSTT













SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence VDRVYNEGVVQAVRKYAETHGPARVAVFVPGLTGKNGALXVAKHIKQTTPYTTIVLSRKTYERNIKLVFK
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Known secondary structure (DSSP) SS
S
S

S
SSSTT
TTSS

TTTTTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence QYPRGXCVVTTSISEDLDAVFDTCQQYHYLVTAVGTKGVITPSTQAQTCQRRGRIGRRREGGYYRPANYD
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Known secondary structure (DSSP)

SS

GGG


S


SSB

TTSSSSS
SS

 .........290.........300.........310.........320.........330.........340.........350
Sequence ITQAPVLDHPDSVTLLEANXCLRALDLPEEPCGAAVQQAXLRLQPSKDQVYRWLTEQDTETLTEAXAIYS
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Known secondary structure (DSSP) TTTS
SSS
TTBTT













S
B
 .........360.........370.........
Sequence AEGGRRSREQERAIRNRXRSYFNDARWER
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Known secondary structure (DSSP) TTS
B

TT
B
TTTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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