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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6knbA_

Fold library idPDB HeaderMoleculeTitle
c6knbA_6.90PDB header: replication/dnaChain: A: PDB Molecule: dna polymerase ii small subunit;


Added to library: Sat Aug 8 08:26:46 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence YSTYSDLVIAPKEGFHYRAKEIPDEWELAFDVKNVKFEVPKVKNAQSKEGEVIIQAYSSYFKSRLKKMRR
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S

TSSSSSS
S




SS

S
 .........80.........90.........100.........110.........120.........130.........140
Sequence IFRENPEIGTIVDIAKLSYVREDDVTIIGLVNEKRETRKGYLFEIEDATGRIKVFIGSDKEGANEAYSTI
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Known secondary structure (DSSP) STT


B

SGGGGT

SS



SSS
SS
TTSSTTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence MPDSVVAFRGTPGKGIFFANRVFLPDVPKFKRSKPPLEEKVYAILLSDIHVGSNKFCEEAFIKFLEWLNG
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Known secondary structure (DSSP) SSS




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TTBTT

TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence EVNSRTEEELVSRIKYIIIGGDVVDGVGIYPGQYNELAIPDIFDQYEALANLLKQVPDHITMFIGPGNHD
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S
S
TTBSSS
SSS
SSS


SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence AARTALPQPGFYEEYAKPLYKLKNAVIISNPAVIRLHGRDFLVAHGRGIEDVVDFVPNRSHHRPAEAMVE
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Known secondary structure (DSSP) SS
SSS
B



SSTT
SS


BSTT



SSS

TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence LLKLRHIAPTFGNKVPIAPDPEDTLVIESVPDLFQAGHVHVMQYKTYNGVFVINTGTWQAQTEFQKMVNI
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Known secondary structure (DSSP) TTTSS



SSSS




S



S
SS

SBB


S




TT



SS


T
 .........430.........440.........450
Sequence IPTPARVPIIDVETARLRAVVRFDQFCEGV
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Known secondary structure (DSSP)



STTTT



GGGS



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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