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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6jshA_

Fold library idPDB HeaderMoleculeTitle
c6jshA_5.10PDB header: transferaseChain: A: PDB Molecule: fatty acid synthase subunit alpha;


Added to library: Sat Sep 28 10:07:19 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKLSQYVQE
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Known secondary structure (DSSP)

TTTTSST

GGGGTT



SS
T
 .........80.........90.........100.........110.........120.........130.........140
Sequence MALGGPITKESQPTIEEDLTRVYKAISAQADKQDISSSTRVEFEKLYSDLMKFLESSKEIDPSQTTQLAG
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Known secondary structure (DSSP)


TTTS

TTSSTT
SS













 .........150.........160.........170.........180.........190.........200.........210
Sequence MDVEDALDKDSTKEVASLPNKSTISKTVSSTIPRETIPFLHLRKKTPAGDWKYDRQLSSLFLDGLEKAAF
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Known secondary structure (DSSP)


SSS









SS
SSS
SSS
S
SS



SSSS

TTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence NGVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFN
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Known secondary structure (DSSP) S




S


S
STTSTTT


SS



SS




 .........290.........300.........310.........320.........330.........340.........350
Sequence QGSKQDVEALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKK
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Known secondary structure (DSSP) SSSTTTT

TTTTS





B







S

TT


TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence QKSARGIETRPAQVILPMSPNHGTFGGDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLM
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Known secondary structure (DSSP) T
TTS


B

S
SS
SSS
TTGGGSSSS
TTT

B







SSS
 .........430.........440.........450.........460.........470.........480.........490
Sequence SANNIIAEGIEKMGVRTFSQKEMAFNLLGLLTPEVVELCQKSPVMADLNGGLQFVPELKEFTAKLRKELV
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Known secondary structure (DSSP)


SS

SSTTTTT




SSTTTTSTTT






S
SGGGSSS
 .........500.........510.........520.........530.........540.........550.........560
Sequence ETSEVRKAVSIETALEHKVVNGLERVIVVTGFAEVGPWGSARTRWEMEAFGEFSLEGCVEMAWIMGFISY
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Known secondary structure (DSSP)



SS

SSS
TT
SS

TTTGGG

 .........570.........580.........590.........600.........610.........620.........630
Sequence HNGNLKGRPYTGWVDSKTKEPVDDKDVKAKYETSILEHSGIRLIEPELFNGYNPEKKEMIQEVIVEEDLE
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Known secondary structure (DSSP)


SS

SSSS



STTT

S


SSSTTTTTSSTTTTTTSSSS

SS
SS


SSS






 .........640.........650.........660.........670.........680.........690.........700
Sequence PFEASKETAEQFKHQHGDKVDIFEIPETGEYSVKLLKGATLYIPKALRFDRLVAGQIPTGWNAKTYGISD
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Known secondary structure (DSSP)







TTS
TTS





TTSS




S










S






S


SS

S
 .........710.........720.........730.........740.........750.........760.........770
Sequence DIISQVDPITLFVLVSVVEAFIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFKDEPVQN
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Known secondary structure (DSSP) SSTTTS
TTTT


GGGGTTS


S








S


TTTTTTTT



S
 .........780.........790.........800.........810.........820.........830.........840
Sequence DILQESFINTMSAWVNMLLISSSGPIKTPVGACATSVESVDIGVETILSGKARICIVGGYDDFQEEGSFE
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Known secondary structure (DSSP) TTSGGGSSSTTSS










TTS
SSSTT

S







TTTSSS
 .........850.........860.........870.........880.........890.........900.........910
Sequence FGNMKATSNTLEEFEHGRTPAEMSRPATTTRNGFMEAQGAGIQIIMQADLALKMGVPIYGIVAMAATATD
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Known secondary structure (DSSP) SSSSS
S

SSSSTTT


TTT


TTTT










SSTTTTTT














 .........920.........930.........940.........950.........960.........970.........980
Sequence KIGRSVPAPGKGILTTAREHHSSVKYASPNKRDPRIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP)


S
SS


STTSSSSTT




S
S





S


TTT






SSSSSS
 .........990.........1000.........1010.
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP) S
TT
SS






SSSS



SS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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