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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6jqfA_

Fold library idPDB HeaderMoleculeTitle
c6jqfA_1.90PDB header: hydrolaseChain: A: PDB Molecule: glycoside hydrolase, family 20, catalytic core;


Added to library: Sat Dec 14 08:44:59 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KQIADSLSIPPVKAGAKQLPXPSVSGAQIKLLGADYEQLVNSKGKIAPVISDTPVNVSFKVTKDGKEAVS
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Known secondary structure (DSSP)
T






TT
SB





TTSS
TTTB
TT
BB


SS
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence KDYEIXLQAPQAAQGNPKPRIIPEILQWKGGQGEYKLGNTVTIACPDKELGKLFAADXEDVLGKKVKLVA
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S




SS

S

S
S
SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence PGAKADISLSLLKGGNLGREGYRLQIARDGVRLGAAAPTGLFWGTRTLLQXLRQTPGSVPCGTAVDFPRY
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Known secondary structure (DSSP) TTS

S

SSS
TTT
TTSS
TT

S
 .........220.........230.........240.........250.........260.........270.........280
Sequence QLRGFXLDVARTPYPLSYLKDVIRTXAWYKXNDLHLVINNNYIFHEHYVDNGHDPFKESYAAFRLESKXK
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Known secondary structure (DSSP) S

SSS


TT



S
TT

S

B

S
B
 .........290.........300.........310.........320.........330.........340.........350
Sequence GKDGTPLTARDLFYTKKEFADLVSYARKYGVNIVPEFDTPGHALSFTRLRPDLIYKGPXNHEKRRCEXLD
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Known secondary structure (DSSP)
TTS
BSS
SS

B
TT
SSS
TT
GGGB

S

SSGGGGGG
B
 .........360.........370.........380.........390.........400.........410.........420
Sequence AANPETIDLVSKVFDEYXLKDPKLGRPVFADCGVVHVGADEFYGDKEDYRHFANAVLTHALKRGYTPRIW
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Known secondary structure (DSSP) TT
STTTTTTTT
S




S
TT
 .........430.........440.........450.........460.........470.........480.........490
Sequence GSLSAKPGKTPVVSKGVQXNLWSTGWXKAWEAVNQGYDVINTNDGALYIVPFAGYYRXDRNHKGLYNNWI
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Known secondary structure (DSSP)

TTTS

SS



TT


TTT

TT



TT
SS
BGGG


 .........500.........510.........520.........530.........540.........550.........560
Sequence PNRIGNETLPSGHPQLLGGTFAVWNDETDIXHTGYAPYDIWGIISGSXDVLSQKLWGTAKAPDTFEQHRE
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Known secondary structure (DSSP) TTTT

TT
TT


S
GGG




S
SS
SS
 .........570.........580.........590.........600.........610.........620.........630
Sequence LVSSIGNAPRTNPLHKWKDSQPLTVKPSSLPQKLDKPALGPNYRLTXELELTAAPEGKEQVLLAAPEGEL
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Known secondary structure (DSSP)
S
TT

TT


SS




SSSS




B
SS



TT

TT
 .........640.........650.........660.........670.........680.........690.........700
Sequence LAVXKDGTVGFRRDDSLEFSFGAKLPVGKKVKVEIVGEPEKTSLLLDGEPAGTAVLKNFSDKSKDFSDKF
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Known secondary structure (DSSP)
TTS

TTS

S



BTTTTT

SSGGGTTT

TT
 .........710.........720.........730....
Sequence KHRPKVHRSTFILPLKELGSSFQGKVFHXNVQPL
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Known secondary structure (DSSP)

S
SS





B

S
SS

S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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