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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6jbjB_

Fold library idPDB HeaderMoleculeTitle
c6jbjB_3.60PDB header: membrane proteinChain: B: PDB Molecule: atp-binding cassette sub-family d member 4;


Added to library: Sat Sep 14 10:33:41 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence RPRLDLQFLQRFLQILKVLFPSWSSQNALMFLTLLCLTLLEQFVIYQVGLIPSQYYGVLGNKDLEGFKTL
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Known secondary structure (DSSP)




SS
STTSTTTSTTGGGTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence TFLAVMLIVLNSTLKSFDQFTCNLLYVSWRKDLTEHLHRLYFRGRAYYTLNVLRDDIDNPDQRISQDVER
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Known secondary structure (DSSP) TSSSS
SSS

 .........150.........160.........170.........180.........190.........200.........210
Sequence FCRQLSSMASKLIISPFTLVYYTYQCFQSTGWLGPVSIFGYFILGTVVNKTLMGPIVMKLVHQEKLEGDF
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Known secondary structure (DSSP) TTTTTTTTTTT
TTSTTTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence RFKHMQIRVNAEPAAFYRAGHVEHMRTDRRLQRLLQTQRELMSKELWLYIGINTFDYLGSILSYVVIAIP
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Known secondary structure (DSSP) TTTTTTTTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence IFSGVYGDLSPAELSTLVSKNAFVCIYLISCFTQLIDLSTTLSDVAGYTHRIGQLRETLLDMSLDTAFLL
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Known secondary structure (DSSP) T
TT


SSSSSTTTTTTSTSGGG



 .........360.........370.........380.........390.........400.........410.........420
Sequence ERVSISAPSSDKPLIKDLSLKISEGQSLLITGNTGTGKTSLLRVLGGLWTSTRGSVQMLTDFGPHGVLFL
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Known secondary structure (DSSP) S


B
SSSSSBSS




TTT

B



SSSSTTSS

SSSSS
BSSSS
 .........430.........440.........450.........460.........470.........480.........490
Sequence PQKPFFTDGTLREQVIYPLKEVYPDSGSADDERILRFLELAGLSNLVARTEGLDQQVDWNWYDVLSPGEM
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Known secondary structure (DSSP)
SS



SS
STTTS



S

T
TTTTT
S




SSSSS
 .........500.........510.........520.........530.........540.........550.........560
Sequence QRLSFARLFYLQPKYAVLDQATSALTEEVESELYRIGQQLGMTFISVGHRQSLEKFHSLVLKLCGGGRWE
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Known secondary structure (DSSP) T

S




SS
TTTTT

B
B



TTGGGT
S





SSS


 .....
Sequence LMRIK
Predicted secondary structure
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Known secondary structure (DSSP)





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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