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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6j6tD_

Fold library idPDB HeaderMoleculeTitle
c6j6tD_2.36PDB header: gene regulationChain: D: PDB Molecule: histone deacetylase 15;


Added to library: Sat Jan 25 08:20:04 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TSSTAVGFDERMLLHSEFEVKAQPHPERPDRLRAIAASLATAGVFPGRCLPINAREITKQELQMVHTSEH
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Known secondary structure (DSSP)




GGGGG


SS

SS

SS
TTT




S






TTTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence VDAVDTTSQLLYSYFTSDTYANEYSARAARLAAGLCADLATDIFTGRVKNGFALVRPPGHHAGVRHAMGF
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Known secondary structure (DSSP) GGGSSTTTTTTSSS

SS

TT

SS

BTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence CLHNNAAVAALVAQAAGAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHEGGNFYPGTGAADEVGSN
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Known secondary structure (DSSP) BSS
T
S

SSS

TTT
SS
GGGTSTT



TT



T
 .........220.........230.........240.........250.........260.........270.........280
Sequence GGEGYCVNVPWSCGGVGDKDYIFAFQHVVLPIASAFSPDFVIISAGFDAARGDPLGCCDVTPAGYSRMTQ
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Known secondary structure (DSSP) T
TTSSSS

BT

S

TTBBT
TTT
BBB
 .........290.........300.........310.........320.........330.........340.........350
Sequence MLGDLCGGKMLVILEGGYNLRSISASATAVIKVLLGETPSVAGLQTVLDVLNIQLEFWPSLAISYSKLLS
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Known secondary structure (DSSP) TTTTT






TT



TTT
TTTT
 .
Sequence E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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