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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6g45C_

Fold library idPDB HeaderMoleculeTitle
c6g45C_2.50PDB header: viral proteinChain: C: PDB Molecule: putative major capsid protein;


Added to library: Sat Jul 7 08:22:33 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NTPPELDTVLQAPYAYNWPTSKNVKIASRIGIPYSTFQTIQPVSDAPNNGIGQITFNQPLGNLTGGAPRL
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GGGS


TTT









SS


SS


TTS


SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence RVSFTAEIKNILADSSLKDQIGLKSFPVNRSIPVAVINMNGKTFTSYPAQLIKLHQYNADPLELALLSPC
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Known secondary structure (DSSP)
B
TT


TT

SST
S
TT
TTSS

S
 .........150.........160.........170.........180.........190.........200.........210
Sequence SDVDEYNKIKAVSMNNPYRQGTESTDSRMSRGLGCNYAYYIHPRAAGSTSVKIDFVVDEALVANPTQYKN
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Known secondary structure (DSSP)



SBSS

TT
TT
TT

GGG
S
GGG

BTTSSS



TT





TT

STT
 .........220.........230.........240.........250.........260.........270.........280
Sequence IKDPVPFRNLNTFKVILDGQFKPENMIGIADDVKLVAGKADFEVDITGFKINMLVQNWVAPLEIGDIPKT
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Known secondary structure (DSSP)
SS


SS


TT

B
TT
SS



GGG



SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence IIYNTPLISLEGNISSMCLNTKDPYGIPGERNKHILTTHSMAMNNVPSMFAVMVSQETPTKKFAPDQLAG
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Known secondary structure (DSSP)


S
TTS
GGGS




SS

SSS
SSTTS


B
 .........360.........370.........380.........390.........400.........410.........420
Sequence IIGLEIKVDSDVGIFRELEQQQLYELSSSNGYNKRFSCFSGALANGLTVADPAVAAGNKFKEAIFGAGSV
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Known secondary structure (DSSP) TTTTT

TT

S
T

BS

TTS
GGG

BB


 .........430.........440.........450.........460.........470.........480.........490
Sequence IFFRPSDLGLKDYNVMANANKSINMQVQATFVTPEAAGTGAHYKLEVFSIRDNLTYSFEDGTFMDDLTLY
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Known secondary structure (DSSP)
GGGG

S
TT

TTB






TT

TTS


B
 .........500...
Sequence TPDQLLRSPLKLT
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SS confidence












Known secondary structure (DSSP)
TS





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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