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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6e6bA_

Fold library idPDB HeaderMoleculeTitle
c6e6bA_4.52PDB header: cell adhesionChain: A: PDB Molecule: protocadherin gamma b4;


Added to library: Sat Apr 13 09:10:40 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QIRYKIPEEMPTGSVVGNLAKDLGFSVQELPTRKLRISSEKPYFSVSSESGELLVSSRLDREQICGKKLM
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Known secondary structure (DSSP)
SS

TT

T

TTS


SS

TTTT
S


TTT
SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence CALEFEAVAENPLNFYHLSVELEDINDHTPKFAHTSFELQISESSKPGTRFILGSAHDADIGTNSLQNYQ
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TTTT



S



S
STT

TT









GGGS
 .........150.........160.........170.........180.........190.........200.........210
Sequence LSPNDHFSLVNKEKSDGSKYPEMILKTALDREKQKLYHLTLTALDFGHPPLNSTAQIQVLVTDANDNPPV
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SS
TTS

S


TTT
SSSSS



S
S

 .........220.........230.........240.........250.........260.........270.........280
Sequence FSQDIYRVSLPENVYPGTTVLRVVATDQDEGVNSEITFSFSEAGQVTQFNLDSNTGEITTLHTLDFEEVK
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Known secondary structure (DSSP) S
S

BTT

TT



SS
SGGG


SS



S
TTT

S


TTT
S
 .........290.........300.........310.........320.........330.........340.........350
Sequence EYSLVLEAKDGGGMIAQCTVEIEVLDENDNVPEVLFQSLPDLIMEDAEPGTYIALLKTRDKDSGRNGEVI
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Known secondary structure (DSSP)
TT


B

S
S



STT

TT

SS
GGGT
 .........360.........370.........380.........390.........400.........410.........420
Sequence CKLEGGAPFKILTSSGNTYKLVTDGVLDREQNPEYNITIRATDKGDPPLSSSSSVTLHIGDVNDNAPVFT
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Known secondary structure (DSSP) SSSSTT
S


TTT

SSSS



S



S
 .........430.........440.........450.........460.........470.........480.........490
Sequence KVSYLVHVAENNPPGASIAQVSASDPDLGANGQVTYYIIASDLEPESLWSYVTINAQSGVLFAQRAFDHE
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Known secondary structure (DSSP) SSSS

TT






GGGG
SS
TTT
TTT
SS


TT
 .........500.........510.........520.........530.........540.........550.........560
Sequence QLRSFQLTLQARDHGSPTLSANVSMRLLVGDRNDNAPRVLYPTLEPDGSALFDMVPRSAEPGYLVTKVVA
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Known secondary structure (DSSP) T
SSSSS





S

S


TT
TT

TT

 .........570.........580.........590.........600.........610.........620.........630
Sequence VDADSGHNAWLSYHVLQASDPGLFSLGLRTGEVRTARALGDRDSARQRLLVAVRDGGQPPLSATATLHLI
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Known secondary structure (DSSP)
SS
GGGG
SSTTT
TTT

S


SSS
SSSSS

 ...
Sequence FAD
Predicted secondary structure
SS confidence


Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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