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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5yvqA_

Fold library idPDB HeaderMoleculeTitle
c5yvqA_2.10PDB header: viral proteinChain: A: PDB Molecule: tail fiber protein s;


Added to library: Sat May 25 08:22:46 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KAVKIAMDNANARLAKDRNGADIPNKPLFIQNLGLQETVNRARNAVQKNGDTLSGGLTFENDSILAWIRN
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Known secondary structure (DSSP)
TS

GGGTTTT
S
T
T


TT



SS




SS

T
 .........80.........90.........100.........110.........120.........130.........140
Sequence TDWAKIGFKNDADSDTDSYMWFETGDNGNEYFKWRSKQSTTTKDLMNLKWDALSVLVNAIVNGEVISKSA
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Known secondary structure (DSSP) T
SSTT
SS
SSS


TTTTSS



SS




SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence NGLRIAYGNYGFFIRNDGSNTYFMLTNSGDNMGTYNGLRPLWINNATGAVSMGRGLNVSGDTLSDRFAIN
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Known secondary structure (DSSP) S


SSS

SS

TT
TTS


S

STTT


SS



SS



S




 .........220.........230.........240.........250.........260.........270.........280
Sequence SSNGMWIQMRDNNAIFGKNIVNTDSAQALLRQNHADRKFMIGGLGNKQFGIYMINNSRTANGTDGQAYMD
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Known secondary structure (DSSP)




GGGGGTSS



SS


BT

SSBTTTT

SSS
S
 .........290.........300.........310.........320.........330.........340.........350
Sequence NNGNWLCGAQVIPGNYANFDSRYVRDVRLGTQSLTGGLSRDYKAPSGHVITGFHTDDKVYIRPVQKNING
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Known secondary structure (DSSP) TTS
SS



S

TTS




S

S




TT


TT
 ........
Sequence TWYNVASA
Predicted secondary structure

SS confidence







Known secondary structure (DSSP)




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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