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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5ykhA_

Fold library idPDB HeaderMoleculeTitle
c5ykhA_2.46PDB header: rna binding proteinChain: A: PDB Molecule: pumilio homolog 1;


Added to library: Sat Mar 17 09:08:07 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GRSRLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVF
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Known secondary structure (DSSP)


TT

TT

GGGGTT
TSTSS
STTTSTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence GNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMVRELHQHTEQLVQD
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Known secondary structure (DSSP)

TT
TSTTS
GGGTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence QYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPH
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Known secondary structure (DSSP) TTS
TT
STTS
TS


SSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence SALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAE
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Known secondary structure (DSSP)
TSTTT

TTTSTTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence IRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTSALYTMMKDQYANYVVQKMIDVAEPGQRKIV
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Known secondary structure (DSSP) TT
TSTTTS


STTS
 .........360.........370.........380
Sequence MHKIRPHIATLRKYTYGKHILAKLEKYYMK
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Known secondary structure (DSSP) GGGTTSTTTTTTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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