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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5xjgA_

Fold library idPDB HeaderMoleculeTitle
c5xjgA_2.40PDB header: signaling protein/membrane proteinChain: A: PDB Molecule: vacuolar protein 8;


Added to library: Sat Jun 10 08:27:22 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PIADNEREAVTLLLGYQLDFYSGGPLKALTTLVYSDNLNLQRSAALAFAEITEKYVRQVSREVLEPILIL
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Known secondary structure (DSSP)





SSSTT







 .........80.........90.........100.........110.........120.........130.........140
Sequence LQSQDPQIQVAACAALGNLAVNNENKLLIVEMGGLEPLINQMMGDNVEVQCNAVGCITNLATRDDNKHKI
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Known secondary structure (DSSP) TT
SSTTSTTTTSS
TTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence ATSGALIPLTKLAKSKHIRVQRNATGALLNMTHSEENRKELVNAGAVPVLVSLLSSTDPDVQYYCTTALS
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Known secondary structure (DSSP) TTTTTT
SST
SSTTT
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence NIAVDEANRKKLAQTEPRLVSKLVSLMDSPSSRVKCQATLALRNLASDTSYQLEIVRAGGLPHLVKLIQS
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Known secondary structure (DSSP) TTS
TTTT
SSTTSTTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence DSIPLVLASVACIRNISIHPLNEGLIVDAGFLKPLVRLLDYKDSEEIQCHAVSTLRNLAASSEKNRKEFF
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Known secondary structure (DSSP) SSTTSGGGTT
GGG
TT
TSS

 .........360.........370.........380.........390.........400.........410.........420
Sequence ESGAVEKCKELALDSPVSVQSEISACFAILALADVSKLDLLEANILDALIPMTFSQNQEVSGNAAAALAN
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Known secondary structure (DSSP) TTTTTSS
TT
TTTTT
SS
 .........430.........440.........450.........460.........470.........480.........
Sequence LCSRVNNYTKIIEAWDRPNEGIRGFLIRFLKSDYATFEHIALWTILQLLESHNDKVEDLVKNDDDIING
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Known secondary structure (DSSP) TSS
S

TSS
STT
SSS





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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