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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5xfpE_

Fold library idPDB HeaderMoleculeTitle
c5xfpE_2.30PDB header: transcription/dnaChain: E: PDB Molecule: phd finger protein 1;


Added to library: Sat Sep 16 08:32:17 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence RLWEGQDVLARWTDGLLYLGTIKKVDSAREVCLVQFEDDSQFLVLWKDISPAALPGEELLCCVCRSETVV
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Known secondary structure (DSSP)


TT

TTS
TTTTTTS
GGG


SS
SSS
TTT




B
 .........80.........90.........100.........110.........120.........130.........140
Sequence PGNRLVSCEKCRHAYHQDCHVPRAPAPSWVCRQCVFAIATKRGGALKKGPYARAMLGMKLSLPYGLKGLD
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Known secondary structure (DSSP) TTB

TTT

GGGSSS










TTS


SSTTS
SS
GGG

 .........150.........160.........170.........180.........190.........200.........210
Sequence WDAGHLSNRQQSYCYCGGPGEWNLKMLQCRSCLQWFHEACTQCLSKPLLYGDRFYEFECCVCRGGPEKVR
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Known secondary structure (DSSP) B
TTSS
BTT


TTT




TTTTBTTT

GGG
S

SS


TT



TSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence RLQLRWVDVAHLVLYHLSVCCKKKYFDFDREILPFTSENWDSLLLGELSDTPKGERSSRLLSALNSHKDR
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Known secondary structure (DSSP)





S
TTTTTGGGT

GGGGGS
TT
TTT
 .........290.........300
Sequence FISGRECLFGLHARMPPPVE
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Known secondary structure (DSSP)


GGG






Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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