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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5v6pA_

Fold library idPDB HeaderMoleculeTitle
c5v6pA_4.10PDB header: transferaseChain: A: PDB Molecule: erad-associated e3 ubiquitin-protein ligase hrd1;


Added to library: Sat Aug 19 08:44:01 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LAIFVVVTYLLTFYCVYSATKTSVSFLQVTLKLNEGFNLMVLSIFILLNSTLLWQLLTKLLFGELRLIEH
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Known secondary structure (DSSP)
T
SSSTTTTT

 .........80.........90.........100.........110.........120.........130.........140
Sequence EHIFERLPFTIINTLFMSSLFHERYFFTVAFFGLLLLYLKVFHWILKDRLEALLQSINDSTTMKTLIFSR
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Known secondary structure (DSSP) TTTGGGT
 .........150.........160.........170.........180.........190.........200.........210
Sequence FSFNLVLLAVVDYQIITRCISSIYTNQKSDIESTSLYLIQVMEFTMLLIDLLNLFLQTCLNFWEFYRSQQ
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Known secondary structure (DSSP) TTT
TT
 .........220.........230.........240.........250.........260.........270
Sequence SGKFMYEKAIDVFTRFLKTALHLSMLIPFRMPMMLLKDVVWDILALYQSGTSLWKIWRNN
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Known secondary structure (DSSP)

TTSSSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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