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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5n5xG_

Fold library idPDB HeaderMoleculeTitle
c5n5xG_3.20PDB header: transcriptionChain: G: PDB Molecule: rna polymerase i-specific transcription initiation factor


Added to library: Sat Apr 15 08:42:31 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VQGASLYCTLAEDALDLHIVVKSLLCDTNRLDSQYIQTASDLRNYRDGTEIIAYASGKTGSVLNIAVLTR
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TT



SS










TT


S



S

SS


SSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence QNTLHLNRHNNVTSIELHSPIKSIKIPGASESIGRRSNLVGIITENSFQIFRIESVHSRSCDVMVSSSEP
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SSS

S


SS





TTS





SS

SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence LYFVEIDDLQVVDFQFAIIDIKGNWSIGRIPKNFNNQLIDNLHGTIFDPEELSSWKRIEWFSHFQKILVF
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Known secondary structure (DSSP)

SSS



TT


SS







TT




STTSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence DRSKMIEIDFMNNWQTEVVQAKAWSNIRDYKRIDDKNGILLTSREIIIVGASESNDPVRRISWKHDLDPD
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Known secondary structure (DSSP) TTTTTT
S

SSS





SSTT

SS


SSSS




S

B




 .........290.........300.........310.........320.........330.........340.........350
Sequence DTTLRITVQKVKKPDHILLVAFVYSMRHKRIYMHVFSHRKANLFQSLGCSTVLEIPGGTPTGIETIFELV
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Known secondary structure (DSSP)
S


SS

SS
S

BTTTB

B





SS






 .........360.........370.........380.........390.........400.........410.........420
Sequence VDFLVKLRNSSEVYYYALSNTQNSIIVDHPEWASLFNNADEREKESIGALVSQIKLKERERISRVQNLIE
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Known secondary structure (DSSP) TT


S








S

SGGGT
 .........430.........440.........450.........460.........470.........480.........490
Sequence HENSHDEDKYLQDLGYRLSIATNELLESWQKTKDESILSGSLSHSKLKNLLENSDSFASIPEFSSLLDQF
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Known secondary structure (DSSP)
SS
TGGG
S
S

TT
SSS
S

T


 .........500.........510.........520.........530.........540.........550.........560
Sequence FQYYQDQDVTFIGFEKLLHLFLHEDVPGLDIFYNKLLQCWVLVSPQAELLTKEIVKDIIWSLARLEKPSL
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Known secondary structure (DSSP) TTSSSS



SSS


STT
TT



SS
T
 .........570.........580.......
Sequence FEPIQNEISRSLSGPYQDIISSWDMDD
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Known secondary structure (DSSP) TTS


S



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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