Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5n4wA_

Fold library idPDB HeaderMoleculeTitle
c5n4wA_3.90PDB header: ligaseChain: A: PDB Molecule: cullin-2;


Added to library: Sat Jun 10 08:32:25 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MSLKPRVVDFDETWNKLLTTIKAVVMLEYVERATWNDRFSDIYALCVAYPEPLGERLYTETKIFLENHVR
Predicted secondary structure

















SS confidence





































































Known secondary structure (DSSP)

SS




SSGGG



TTTTTTT
SSS

 .........80.........90.........100.........110.........120.........130.........140
Sequence HLHKRVLESEEQVLVMYHRYWEEYSKGADYMDCLYRYLNTQFIKKNPLMEIGELALDMWRKLMVEPLQAI
Predicted secondary structure








SS confidence





































































Known secondary structure (DSSP) SSS
TTTTTTTT



STTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence LIRMLLREIKNDRGGEDPNQKVIHGVINSFVHVEQFPLKFYQEIFESPFLTETGEYYKQEASNLLQESNC
Predicted secondary structure












SS confidence





































































Known secondary structure (DSSP)

TT




TTTT



TTTTTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence SQYMEKVLGRLKDEEIRCRKYLHPSSYTKVIHECQQRMVADHLQFLHAECHNIIRQEKNDMANMYVLLRA
Predicted secondary structure







SS confidence





































































Known secondary structure (DSSP) S
GGGTSSSSTTS


T
 .........290.........300.........310.........320.........330.........340.........350
Sequence VSTGLPHMIQELQNHIHDEGLRATSNLTQENMPTLFVESVLEVHGKFVQLINTVLNGDQHFMSALDKALT
Predicted secondary structure














SS confidence





































































Known secondary structure (DSSP) STT
TTTTTTS

SS

S
 .........360.........370.........380.........390.........400.........410.........420
Sequence SVVNYREPSVCKAPELLAKYCDNLLKKSAGMTENEVEDRLTSFITVFKYIDDKDVFQKFYARMLAKRLIH
Predicted secondary structure

















SS confidence





































































Known secondary structure (DSSP) T








B





TTST
S
T
 .........430.........440.........450.........460.........470.........480.........490
Sequence GLSMSMDSEEAMINKLKQACGYEFTSKLHRMYTDMSVSADLNNKFNNFIKNQDTVSFQIYVLQAGAWPLT
Predicted secondary structure



















SS confidence





































































Known secondary structure (DSSP) T
BS
T
TTTTTSSS









SSS



 .........500.........510.........520.........530.........540.........550.........560
Sequence QAPPQELEKSVQMFELFYSQHFSGRKLTWLHYLCTGEVKMNLKPVAMVTTYQMAVSEVSYKELQDSTQMN
Predicted secondary structure

















SS confidence





































































Known secondary structure (DSSP)






S

SSSS






TT














SS








STT



SS

 .........570.........580.........590.........600.........610.........620.........630
Sequence EKELTKTISLLDVKMINESSFSLNMNFTPQEMEQTRSAVDEDRKMYLQAAIVRIMKARKVLRHNALIQEV
Predicted secondary structure
















SS confidence





































































Known secondary structure (DSSP) TTTSTT


TTTSSS








S


TTS

B
TT
 .........640.........650.........660.........670.
Sequence ISQSRARFNPSISMIKKCIEVLIDKYIERSQASADEYSYVA
Predicted secondary structure















SS confidence








































Known secondary structure (DSSP) TTTT



TT





SS

B


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D