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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5mdoF_

Fold library idPDB HeaderMoleculeTitle
c5mdoF_1.95PDB header: sugar binding proteinChain: F: PDB Molecule: chitoporin;


Added to library: Sat Dec 23 08:28:03 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence EYLTKDSFSYEVYGIIAXQAAYRDYDSGDAKQDDNLGGXQLNNESRIGFRGKKQFANFEPTFIWQIEGGY
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Known secondary structure (DSSP)



GGG
S
SS





TT
SSB

 .........80.........90.........100.........110.........120.........130.........140
Sequence VDPSFGGEGAGLGERDTFVGFESASWGQVRLGRVLTPXYELVDWPASNPGLGDVYDWGGAIGGAKYQDRQ
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Known secondary structure (DSSP) SB
TTS
S


BTSSSTTT
TTTTTTTTTS



SS
S


 .........150.........160.........170.........180.........190.........200.........210
Sequence SNTIRWDSPXYADKFSIDAAVGAGDKAGLGAGDDYWGGIAAHYKLGPLQLDAAYEGNRNIEAEGQTWENN
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Known secondary structure (DSSP)


BTTT
TTGGGTS


TTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence TYLVGVQGWFENGISFFAQYKYXEADASNGVNEKQDAXSAGLXYTTGDWQYKLGYAANFDLERDGKTLSN
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Known secondary structure (DSSP)
TTSTTS
TT


TT
TT
 .........290.........300.........310.........320.........330.........340.
Sequence TSDDVVSAQIXYFVDPSAVLYARARXNDFNEGLDGLDDAARWTSGTNGDYNEYSVGVEYYF
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Known secondary structure (DSSP)

TT




B
TTSSB


TTTT


Download:PDB structure FASTA sequence

Hidden Markov model

View in Jmol



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Commercial users please contact Michael Sternberg

Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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