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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5kzsA_

Fold library idPDB HeaderMoleculeTitle
c5kzsA_2.30PDB header: unknown functionChain: A: PDB Molecule: putative cell surface protein, similar to internalin


Added to library: Sat Jul 29 08:56:26 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SDLYPLPAPIIDVFPDEGLAKDXAKNLNKDSVNDVIDQDDLDALTGLGFETETITNDSXQLLERAXFNNV
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SSS
ST
S
TT

T



TT

GGGGS

SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence NIVSVXEFGEDLTEFPDISTIPHLNTLFFNTPPEGVTRNLSLPDYQNYPEXVTITXSGSNLIGAIPDFTG
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Known secondary structure (DSSP)

S

TT






TT
TT





TT







SS
TT


TTS
S




SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence XPDLSQLYXADXXITSDDVPDFHTIPKLSTLDLSHNQLTNLPDFQNLTNLAELNLSFNNLTNTXTNFTNL
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Known secondary structure (DSSP)
TT



SS


GGG




S
TT



SS

S




SS
TT



SS






S

 .........220.........230.........240.........250.........260.........270.........280
Sequence SNLNNLNLDYNHLNELPSNVLNSIFIENQSGTVPDQIIKQGETCTIQLPIYFQLAEINXLVNPTVLGSYS
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Known secondary structure (DSSP) TT



SBSS

GGG
TT
S




TT


TT

S



 .........290.........300.........310.........320.........330......
Sequence ADIPVEVVTTTNADTESITLDTSELSPGVYNFNVQFNDAYPITQEGCVYDWVLTVN
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Known secondary structure (DSSP) SSS

TTTT

TT

SS

TTTSSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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