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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5igoD_

Fold library idPDB HeaderMoleculeTitle
c5igoD_1.60PDB header: hydrolase/peptideChain: D: PDB Molecule: e3 ubiquitin-protein ligase cop1;


Added to library: Sat Apr 23 08:55:45 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence RYSRLRVIAEIRHGDIFHSANIVSSIEFDRDDELFATAGVSRCIKVFDFSSVVNEPMQCPIVEMSTRSKL
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Known secondary structure (DSSP)




SSTTTS



TTSSTTT





S
SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence SCLSWNKHEKNHIASSDYEGIVTVWDVTTRQSLMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKVKVWCT
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Known secondary structure (DSSP)
SSSTTTTS
TTTT


SS

SSSTTTTST
 .........150.........160.........170.........180.........190.........200.........210
Sequence RQEASVINIDMKANICCVKYNPGSSNYIAVGSADHHIHYYDLRNISQPLHVFSGHKKAVSYVKFLSNNEL
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Known secondary structure (DSSP) T
SS
S
SS

TT
TTTTS
TT
TTS
S


SS
SSSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence ASASTDSTLRLWDVKDNLPVRTFRGHTNEKNFVGLTVNSEYLACGSETNEVYVYHKEITRPVTSHRFGSP
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Known secondary structure (DSSP) TTTTTTT

S

SSS



SS

TTSTT
SS
S


G
 .........290.........300.........310.........320..
Sequence DMDDAEEEAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLAA
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Known secondary structure (DSSP) GGSSSS

SS



TTSSTT



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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