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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5fokA_

Fold library idPDB HeaderMoleculeTitle
c5fokA_1.90PDB header: metal transportChain: A: PDB Molecule: iron transport outer membrane receptor;


Added to library: Sat May 21 15:08:30 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DETTYNVDRSASKKYTAPLLDTPKTVTVIPQQVIKDTGALTLADALRTTPGITFGADRPFIRGFNAESDT
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Known secondary structure (DSSP)
TT
S


S
S
TT

S
GGGSSS

TT

STTSSS

TT
GGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence FLDGMRDVASQTREVFNVEQIEVSKGPGSAYTGAGSTGGSLNLISKTAKQDNFTDAGFTWGSDQTRRTTL
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Known secondary structure (DSSP) TT
TT




STT
SSS
SS

TT

S




SS
TT

 .........150.........160.........170.........180.........190.........200.........210
Sequence DVNRMIGDNAAFRLNLMKHDAHVAGRDEVSVSRWGVAPTVTFGFDTPTRATLSYYHLSTDDMPDYGLPLT
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Known secondary structure (DSSP) TTT
TTSTT

TTSS




B
 .........220.........230.........240.........250.........260.........270.........280
Sequence NVNRSKANPSKPASVDRDNFYGLKDRDYRKSTTDSGTFRIEHDLNDNLTLSNSTRLVRTTLDYIVSNPDD
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Known secondary structure (DSSP)
SS
SSSS
B
B
SS
TT


S
TTT
TTST
 .........290.........300.........310.........320.........330.........340.........350
Sequence SRGNVANGYVYRSAKSRNSTSKGWVNQTDLKANFETGFIKHTLVTGLEFSYEDVHNRPYAITSGGGAGNT
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Known secondary structure (DSSP) T
S
GGGTTT


SS
S
SS
 .........360.........370.........380.........390.........400.........410.........420
Sequence CNARLLASGDCTSLNRPTPGDNWTGSITDGLAYTDTDTKTSAAYVFDTLKLSEQWELNLGLRYDDFDTKS
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Known secondary structure (DSSP)

TTSSSS

TT





S

SSS
 .........430.........440.........450.........460.........470.........480.........490
Sequence SGYQTAGRNGPAGYFKRENNSHFWNYQTGLVYKPAPNGSIYLAWSTSSNPRNRNLELGTKWAFFDDALSL
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Known secondary structure (DSSP)
SBTTBSSTT


TTTT
 .........500.........510.........520.........530.........540.........550.........560
Sequence NAALFRTDKTNARLQVLDGEQRVQGVELGFNGKLTEKWKVFGGYTYLDSEIRKSTVKSDEGNKMPQTAQN
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Known secondary structure (DSSP) SS





SSSSSS
SSGGGTT


TT

S
 .........570.........580.........590.........600.........610.........620.........630
Sequence NFTLWTTYDLLQNFTIGGGTTYVDKQYGNTANSTYIPSYWRYDAMASYKVSKNVDLQLNVQNLTDKRYFD
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Known secondary structure (DSSP) TT

SSTT

B

TTSTT



 .........640.........650......
Sequence QVYSTHMAHVAPGRTALLGVNFHFSA
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Known secondary structure (DSSP)
SSS





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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