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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5ek8A_

Fold library idPDB HeaderMoleculeTitle
c5ek8A_PDB header: oxidoreductaseChain: A: PDB Molecule: lipoxygenase;PDBTitle: crystal structure of a 9r-lipoxygenase from cyanothece pcc8801 at 2.72 angstroms


Added to library: Sat Dec 26 08:19:38 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MSTKTKTIFDEIKAALVLKVIDSPLGRKLIEEKAEKQVSKTQEAITKPIEQLNKATGQLLFSDTNKPLHN
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Known secondary structure (DSSP)
SST
B






S
TTTSTTT

B

S
 .........80.........90.........100.........110.........120.........130.........140
Sequence IELEVWDRDVGTPSDYLGKGVTDQNGRFEIYYDPEKAGFKDAPDLELRVIDNRVTFDSDNQPVYTNRIAY
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Known secondary structure (DSSP)


TTS



TTS
GGGG
SSSS


TTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence IIKGGDNVTQKTYDFGTLTVPYWPYDPNSPFARIFMPNPEETPDDYSVGRKFQAYASANVLTPIKAKHTI
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Known secondary structure (DSSP)

SS

SS
SS
B
TT
SS

B

S
GGG
SS


 .........220.........230.........240.........250.........260.........270.........280
Sequence ANTLNPKEPSLTQIQADYPPNLTINLDREKPGYTRSDEYFVLRVLNGMNPCLLKRSKSDPNQFKMSFIWD
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Known secondary structure (DSSP)
TT
S
S


STTGGGSSSS



SS
TT

T
 .........290.........300.........310.........320.........330.........340.........350
Sequence NYEKDTEHDLHNVEAYFVLKDGKLFPTMITIQSRYPDSLAPHSPLKDREVYTPNDGEKWLQAKRIFRTAA
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Known secondary structure (DSSP) TS
B
SSB

TTB
SS

STT

B



TTST
 .........360.........370.........380.........390.........400.........410.........420
Sequence LFDGEAIEHYAKAHVQMEQYAVACFRNLRKNPIRLMLTPHLKSIININRRGDDLLVEPNLGLFVTNGPLT
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Known secondary structure (DSSP)




TT
SSSTTTTS
TTT
TSSB
 .........430.........440.........450.........460.........470.........480.........490
Sequence YPGFLQMCTEVVATYDWKDWQPRQPICDDHKYAKAANLYWQILTEYVDAFFAKHQQAIADEWVEIRRFSE
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Known secondary structure (DSSP) TT


TT





SSTT
TT
 .........500.........510.........520.........530.........540.........550.........560
Sequence DLVEHSMPYQPIEGIMANTDSDYEWYDTGELDKPDLPRATFNGKTKVIRPITNSNQPSATDIDNLKQCCR
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Known secondary structure (DSSP) S
B




STTS


SSS

TTS

TTS


TTBSS

S

SSS

 .........570.........580.........590.........600.........610.........620.........630
Sequence HIIFHTTLWHTWVNDSQSDEGGELAYNSLALRNGSFGSETDPNIAPDPIEATNQVYIFSVLNGIKYGLLV
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Known secondary structure (DSSP) TTTS
TTT

S

BTTS
S
TT
TTTS





BTT
 .........640.........650.........660........
Sequence KNEDDDVPEELRTALLNRKDQFAELGIDIGNIRTLINI
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Known secondary structure (DSSP) T
TTS
S
TTTT

GGG
BSS



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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