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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5cqrA_

Fold library idPDB HeaderMoleculeTitle
c5cqrA_PDB header: protein bindingChain: A: PDB Molecule: elongator complex protein 1;PDBTitle: dimerization of elp1 is essential for elongator complex assembly


Added to library: Sat Aug 22 08:23:05 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence HHRALVLAQIRKWLDKLMFKEAFECMRKLRINLNLIYDHNPKVFLGNVETFIKQIDSVNHINLFFTELKE
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Known secondary structure (DSSP)
TTTT
TT

TTT
TT
T



S
 .........80.........90.........100.........110.........120.........130.........140
Sequence EDVTKTMYPAPPDGNKIDLVCDAMRAVMESINPHKYCLSILTSHVKKTTPELEIVLQKVHELQGNAPSDP
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Known secondary structure (DSSP) S
TTTTTS




S

TTTTTSSS

TTSS

SGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence DAVSAEEALKYLLHLVDVNELYDHSLGTYDFDLVLMVAEKSQKEYLPFLNTLKKMETNYQRFTIDKYLKR
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Known secondary structure (DSSP) GS

TTS
TTT

T


TTTTS
TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence YEKAIGHLSKCGPEYFPECLNLIKDKNLYNEALKLYSPSSQQYQDISIAYGEHLMQEHMYEPAGLMFARC
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Known secondary structure (DSSP) TTS
SSST
TTS
TT
TTT
T
 .........290.........300.........310.........320.........330.........340.........350
Sequence GAHEKALSAFLTCGNWKQALCVAAQLNFTKDQLVGLGRTLAGKLVEQRKHIDAAMVLEECAQDYEEAVLL
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Known secondary structure (DSSP) T
TT
TTT

TTT
S

 .........360.........370.........380.........390.........400.........410.........420
Sequence LLEGAAWEEALRLVYKYNRLDIIETNVKPSILEAQKNYMAFLDSQTATFVVQNTENLKDEVYHILKVLFL
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Known secondary structure (DSSP) TT
TTT
TTTTTT




TTSS
 .........430.........440.........450.....
Sequence FEFDEQGRELQKAFEDTLQLMERSNRRTQWKLSLL
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Known secondary structure (DSSP) TT
S











TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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