Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5afrB_

Fold library idPDB HeaderMoleculeTitle
c5afrB_PDB header: motor proteinChain: B: PDB Molecule: dynein heavy chain, cytoplasmic;PDBTitle: n-terminal fragment of dynein heavy chain


Added to library: Sat Feb 21 08:17:20 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence RLANELIEFVAATVTGIKNSPKENEQAFIDYLHCQYLERFQFFLGLFVFLFIVTIDIAIYDANLANSTLL
Predicted secondary structure















SS confidence





































































Known secondary structure (DSSP)







S









B




 .........80.........90.........100.........110.........120.........130.........140
Sequence IIQISAIYNAGNLASIITHGVSSVFGQLIKSIDKTRRKLDDISKQFQQLHTSIETPDLLAXVPSIIKLAV
Predicted secondary structure










SS confidence





































































Known secondary structure (DSSP)





TT











TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence SKGATSHDYANYLPSNDLESXRFLNILQSIANKWFLVLKQTFLDEVEFWSNFYEVLKSLIEQTQSQEFQV
Predicted secondary structure









SS confidence





































































Known secondary structure (DSSP) S
SSSTT

S
SS



T

STTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence CLSVLTNAKRFHNLTNLLNEGSLSDKFKLADKYNQFLSSIPIDEDLQELFPVLASSLKKFRYSGYPVQRF
Predicted secondary structure









SS confidence





































































Known secondary structure (DSSP) S

TTS
TS








S
S


TT
 .........290.........300.........310.........320.........330
Sequence VVLXDKISQEVXDAILSNLSYGSFLGLYEKSAGXIEEWDDIVQDVNLLIR
Predicted secondary structure



SS confidence

















































Known secondary structure (DSSP)



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D