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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5afoA_

Fold library idPDB HeaderMoleculeTitle
c5afoA_PDB header: cell adhesionChain: A: PDB Molecule: fimbriae;PDBTitle: long polar fimbriae adhesin lpfd from the adherent invasive2 e. coli strain lf82


Added to library: Sat Aug 8 08:25:51 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ADWGPCRTASGDPFIFVTSFTKNIQNPTDNVTGQTYPDFYQWALGDKYSGVCECPSPNPTEARPTLYKTE
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Known secondary structure (DSSP)

S
BSSSS


SGGG
STT






SSSS
SS
B

 .........80.........90.........100.........110.........120.........130.........140
Sequence STLAAGHNSTYFKITNNLEVSTRVYIANVGNVQVPFINKSNSQPGRECDQPTFGWTTGSKGQLSLYIAKP
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Known secondary structure (DSSP)
S
B
SSTT
SSSSTTTSS



B


SS

TTSSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence FVGEQNIPQTIIVSVFGTKKENVYSSVPISQVLLSGKVTVTQGCELAAGTSLDIDFGEYQAHDFKGRTGQ
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Known secondary structure (DSSP)
SSSSTT


SS
S



TT



GGGTTT
BTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence PPQNVQKIQKELTFNCTNISDGVHIYLSLEGTPNAAYPSAISLGNADVGAVIEDGKGNILKPNDSNSLLE
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Known secondary structure (DSSP)

TT


S

TT



B
SS
TTS
SSTT
SSS
B

TT
TT

 .........290.........300.........310.........320.........330.........340...
Sequence MNPGSLYEYVKRKVTTTITAYPVSTTGKLPAAGDYSGVATMHVELDTTDLGAKGTLKFSLKIS
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Known secondary structure (DSSP)
B



BTTTSSSS


S



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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