Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5a9qK_

Fold library idPDB HeaderMoleculeTitle
c5a9qK_PDB header: transport proteinChain: K: PDB Molecule: nucleoporin nup37;PDBTitle: human nuclear pore complex


Added to library: Sat Oct 3 09:29:46 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AAYTVDCEDYVHVVEFNPFENGDSGNLIAYGGNNYVVIGTCTFQEEEADVEGIQYKTLRTFHHGVRVDGI
Predicted secondary structure

































SS confidence





































































Known secondary structure (DSSP)


SS




SS
SSSTTS
SS


TTS

S


SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence AWSPETRLDSLPPVIKFCTSAADMKIRLFTSDLQDKNEYKVLEGHTDFINGLVFDPKEGQEIASVSDDHT
Predicted secondary structure
















































SS confidence





































































Known secondary structure (DSSP)
TT

SS
TTS
TTT
TTTS
SS
SSSTTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence CRIWNLEGVQTAHFVLHSPGMSVCWHPEETFKLMVAEKNGTIRFYDLLAQQAILSLESEQVPLMSAHWCL
Predicted secondary structure

















































SS confidence





































































Known secondary structure (DSSP) TTT
SS
TTTTS
SSS
S


SS


T
 .........220.........230.........240.........250.........260.........270.........280
Sequence KNTFKVGAVAGNDWLIWDITRSSYPQNKRPVHMDRACLFRWSTISENLFATTGYPGKMASQFQIHHLGHP
Predicted secondary structure



























SS confidence





































































Known secondary structure (DSSP) TTT
TT



SS




SS
S
SS

SS
SS


TTTT
SS

 .........290.........300.........310........
Sequence QPILMGSVAVGSGLSWHRTLPLCVIGGDHKLLFWVTEV
Predicted secondary structure















SS confidence





































Known secondary structure (DSSP)




SS

TTSSSS



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D