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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5a2kH_

Fold library idPDB HeaderMoleculeTitle
c5a2kH_PDB header: immune systemChain: H: PDB Molecule: ig lambda-1 chain v region s43;PDBTitle: crystal structure of scfv-sm3 in complex with apd-tgalnac-rp


Added to library: Sat Jun 6 08:37:15 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QVQLQESGGGLVQPGGSMKLSCVASGFTFSNYWMNWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRF
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Known secondary structure (DSSP)




TT

SS
GGGS
TTT

GGGTT

TTTTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence TISRDDSKSSVYLQMNNLRAEDTGIYYCTGVGQFAYWGQGTTVTVSIVVTQESALTTSPGETVTLTCRSS
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Known secondary structure (DSSP) GGGT
S

GGG
STTT







S
TT
T
 .........150.........160.........170.........180.........190.........200.........210
Sequence TGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTEDEAIYFCALWYS
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Known secondary structure (DSSP) TB


GGG

TTTTTT
TT

TTTTS

GGG

S
 .........220.....
Sequence NHWVFGGGTKLTVLG
Predicted secondary structure





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Known secondary structure (DSSP) S






Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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