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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4zpmB_

Fold library idPDB HeaderMoleculeTitle
c4zpmB_PDB header: cell adhesionChain: B: PDB Molecule: protein pcdhac2;PDBTitle: crystal structure of protocadherin alpha c2 ec1-3


Added to library: Sat Oct 31 09:06:17 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QLRYSVPEEQSPGALVGNVARALGLELRRLGPGCLRINHLGAPSPRYLELDLTNGALFVNERIDREALCE
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Known secondary structure (DSSP)
TT

TT
T

GGG

TT
TT


S
TTT

S


T
 .........80.........90.........100.........110.........120.........130.........140
Sequence QRPRCLLSLEVLAHNPVAVSAIEVEILDINDNSPRFPRPDYQLQVSESVAPGARFHIESAQDPDVGANSV
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Known secondary structure (DSSP) T
S

TTTT






B
S
STT

TT




B

S
GGGS
 .........150.........160.........170.........180.........190.........200.........210
Sequence QTYELSPSEHFELDLKPLSKVLELVLRKGLDREQTALHYLVLTAVDGGIPARSGTAQIAVRVLDTNDNSP
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Known secondary structure (DSSP)


SS


S


TTT
SSSSS








 .........220.........230.........240.........250.........260.........270.........280
Sequence AFDQSTYRVQLREDAPPGTLVVKLNASDPDEGSNGELRYSLSSYTSDRERQLFSIDVTTGEVRVSGTLDY
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Known secondary structure (DSSP) S
STT

TT




S
GGGG


TTS

TTT

S


T
 .........290.........300.........310....
Sequence EESSSYQIYVQATDRGPVPMAGHCKVLVDIIDVN
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SS confidence

































Known secondary structure (DSSP) TT
S

SSS





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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