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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4zplA_

Fold library idPDB HeaderMoleculeTitle
c4zplA_PDB header: cell adhesionChain: A: PDB Molecule: protein pcdhb1;PDBTitle: crystal structure of protocadherin beta 1 ec1-3


Added to library: Sat Oct 31 09:17:17 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ATIRYSVAEEMESGSFVANVAKDLGLEVGKLAERGARLVAEGNRLHFRLHRKTGDLFVKEKLDREALCGK
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Known secondary structure (DSSP)

TT

TT
TTGGGTS
TT


TT


TTTTSS


TTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence SDPCVLHFEIILAEPLQSFRVEVRVFDINDNAPVFLNKEPLLKIPESTPLGSRFPLQSAQDLDVGLNGLQ
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Known secondary structure (DSSP)
SS


SS








B
S
SS
SS

TT



B

S
GGGS
 .........150.........160.........170.........180.........190.........200.........210
Sequence NYTLSANTYFHLHTRFRSHGPKYAELVLDNPLDREAQPEVNLTITAVDGGSPPKSGTANIRVVVLDVNDH
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Known secondary structure (DSSP)


SS
SSS
S


TTT
S
SSS






 .........220.........230.........240.........250.........260.........270.........280
Sequence VPQFSRLVYRAQVPENSDNGSLVVVVTATDLDEGTNKQITYSLAENPEAVLRTFLVDPQTGEVRLRGPLD
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Known secondary structure (DSSP)

S
STT

TT



S

TTTT


S


TTT
SS


 .........290.........300.........310......
Sequence FEMIETYDIDIQATDGGGLSAHSKVLVEVVDVNDHH
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Known secondary structure (DSSP) TTT
S
SSS
S
TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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