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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4xz8A_

Fold library idPDB HeaderMoleculeTitle
c4xz8A_PDB header: rna binding proteinChain: A: PDB Molecule: nucleoprotein;PDBTitle: the crystal structure of erve virus nucleoprotein


Added to library: Sat Sep 5 08:18:09 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MENLIDFSGRDGLDRWLRATFPDVILSVGLTNYGSLMTSVPDLSHFEQMARQAKSEQEKDAVYSKALTEA
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Known secondary structure (DSSP)






SSTT


B
SSBSS
BS

S



T

S
 .........80.........90.........100.........110.........120.........130.........140
Sequence TRKAAPIAACALTSSKEMVKKGLQWFEDQIISEDGNFLVWHQNYEQLKKAPPSFEQLMGYQMSALNWRQS
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Known secondary structure (DSSP) TT
S
TST
TTTTS


 .........150.........160.........170.........180.........190.........200.........210
Sequence VGYGQLEETAVLVSQVIAQFSVPGTLVVTVQEMIKDMIARRGGGPKRGVSEEHVRCCVDIMNGNLSALIN
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Known secondary structure (DSSP) T

SSGGG
B

SB

SGGGS
S

SSSS
T

TS
 .........220.........230.........240.........250.........260.........270.........280
Sequence PAWGDIDKKNKNGLMLLTTGIAKLRELYGPAAMVKVQQAADKFGEWGKAQDVLDQSRVQEIHQVLLKSIA
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Known secondary structure (DSSP)
TTSSTT
B
TTS
BS
SSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence ESTSFKNQIAQIDSVFSSYYWMWRAGITPESFPLLSDFLFELGQNARGSAKIIKTLDRIGLKWSKPLVNL
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Known secondary structure (DSSP) T



S
TT


TT

TTTTTS


TS

TTTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence FADSTFKMGRIHMHPAILTTGRLNEMGLCFGIIPASHPESAVNGSGFAKNILNVRTDGMNPSAQLIVQLF
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Known secondary structure (DSSP)

TTT

S
GGGS
TT


STTSSS
TTSGGGGGG



GGGGGGB

STT
 .........430.........440.........450.........460.........470...
Sequence DIQRQSRTLSDLDVVSSEHLFHQILVGKRTAYQNAFQVKGNATDTKIVGFDPP
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Known secondary structure (DSSP) T

S

GGGST
SSTTSB
TT
BS
GGG




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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