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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4xupD_

Fold library idPDB HeaderMoleculeTitle
c4xupD_PDB header: sugar binding proteinChain: D: PDB Molecule: endo-1,4-beta-xylanase c;PDBTitle: structure of the n-terminal cbm22-1-cbm22-2 tandem domain from2 paenibacillus barcinonensis xyn10c


Added to library: Sat Jun 6 08:17:32 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ASAAKAGDILLSHSFEEGTTQGWTARGGVKVDVTAEQAYQGKQSLQTTGRTEAWNGPSLSLTDVVHKNEV
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Known secondary structure (DSSP)

SS
TT


TTSS
TT
SS
SS

SSSS



STT

TTT

TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence VEISGYVKLVAGSAPADLKFTVERRDGNGDTQYDQVNAAEQVTDQKWVKLQGQYSYEQGSSLLLYLESTD
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Known secondary structure (DSSP)
TT



TTS

S


SSS


SS
SSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence AKAAYLLDEFQIRLVKAAPQALFKADFEDGNIGNWRARGTEKLEVVSGIGHNSNRSLKTSSRSETYHGPL
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Known secondary structure (DSSP) TT







TT


TT
B
SSS
S

SSSSS

STT


 .........220.........230.........240.........250.........260.........270.........280
Sequence VEVLPYLQKGSTVHISFWAMYDEGPATQVINGSLEKEFNRDTANLEYAMFASTTLNKGQWKKIEADIIVP
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Known secondary structure (DSSP)
GGGS
TT


SSSSTT
TTS
TT



 .........290.........300.........310.........320.
Sequence AESTGISGLRMYAETPWKQSSEVTETDTIPFYVDDVQITAT
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Known secondary structure (DSSP)
GGGT




GGG

TTTT



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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