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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4owtA_

Fold library idPDB HeaderMoleculeTitle
c4owtA_PDB header: dna binding proteinChain: A: PDB Molecule: integrator complex subunit 3;PDBTitle: structural basis of soss1 complex assembly


Added to library: Sat Apr 19 22:54:21 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GGRLLLSTSLDAKDELEERLERCXSIVTSXTAGVSEREANDALNAYVCKGLPQHEEICLGLFTLILTEPA
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Known secondary structure (DSSP)

SSB


SSS


TTS
STT

TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence QAQKCYRDLALVSRDGXNIVLNKINQILXEKYLKLQDTCRTQLVWLVRELVKSGVLGADGVCXTFXKQIA
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Known secondary structure (DSSP) T
SSTTTGGGB
TT
TTTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence GGDVTAKNIWLAESVLDILTEQREWVLKSSILIAXAVYTYLRLIVDHHGTAQLQALRQKEVDFCISLLRE
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Known secondary structure (DSSP) TT


TTT
TT

SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence RFXECLXIGRDLVRLLQNVARIPEFELLWKDIIHNPQALSPQFTGILQLLQSRTSRKFLACRLTPDXETK
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Known secondary structure (DSSP)
GGG
TTTS

TT


TS


TS
 .........290.........300.........310.........320.........330.........340.........350
Sequence LLFXTSRVRFGQQKRYQDWFQRQYLSTPDSQSLRCDLIRYICGVVHPSNEVLSSDILPRWAIIGWLLTTC
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Known secondary structure (DSSP) TTT
BTT

SSSSGGGGT



TTB

T
 .........360.........370.........380.........390.........400.........410.........420
Sequence TSNVAASNAKLALFYDWLFFSPDKDSIXNIEPAILVXHHSXKPHPAITATLLDFXCRIIPNFYPPLEGHV
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Known secondary structure (DSSP)
STTTTTT

TTTS
TTT
S
GGG
 .........430.........440.........450.........460......
Sequence RQGVFSSLNHIVEKRVLAHLAPLFDNPKLDKELRAXLREKFPEFCS
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Known secondary structure (DSSP) TTSSS
ST
TTS

GGG


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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