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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4o9xA_

Fold library idPDB HeaderMoleculeTitle
c4o9xA_PDB header: toxinChain: A: PDB Molecule: tcdb2, tccc3;PDBTitle: crystal structure of tcdb2-tccc3


Added to library: Sat Mar 1 09:07:30 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence FSITELSLPKGGGAITGMGEALTPTGPDGMAALSLPLPISAGRGYAPAFTLNYNSGAGNSPFGLGWDCNV
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Known secondary structure (DSSP)











SS









TT







TTS




TT



TT
SS


 .........80.........90.........100.........110.........120.........130.........140
Sequence MTIRRRTHFGVPHYDETDTFLGPEGEVLVVADQPRDESTLQGINLGATFTVTGYRSRLESHFSRLEYWQP
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Known secondary structure (DSSP)


TTS


SSTT


TTS
B
S

TTSSS

 .........150.........160.........170.........180.........190.........200.........210
Sequence KTTGKTDFWLIYSPDGQVHLLGKSPQARISNPSQTTQTAQWLLEASVSSRGEQIYYQYRAEDDTGCEADE
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Known secondary structure (DSSP) SSSS



TBS
S
SGGGTT
TTS


STT

 .........220.........230.........240.........250.........260.........270.........280
Sequence ITHHLQATAQRYLHIVYYGNRTASETLPGLDGSAPSQADWLFYLVFDYGERSNNLKTPPAFSTTGSWLCR
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Known secondary structure (DSSP) SSS



SS

SS
TTTTS



GGGSS
S

SSSS


SS







 .........290.........300.........310.........320.........330.........340.........350
Sequence QDRFSRYEYGFEIRTRRLCRQVLMYHHLQALDSKITEHNGPTLVSRLILNYDESAIASTLVFVRRVGHEQ
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Known secondary structure (DSSP) SS

TTSS







TTS

SSSS

SS


T
 .........360.........370.........380.........390.........400.........410.........420
Sequence DGNVVTLPPLELAYQDFSPRHHAHWQPMDVLANFNAIQRWQLVDLKGEGLPGLLYQDKGAWWYRSAQRLG
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Known secondary structure (DSSP) TS











GGGTT


SSS
TT
SSS
TT

S
 .........430.........440.........450.........460.........470.........480.........490
Sequence EIGSDAVTWEKMQPLSVIPSLQSNASLVDINGDGQLDWVITGPGLRGYHSQRPDGSWTRFTPLNALPVEY
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Known secondary structure (DSSP) STTS





SS
GGGS
S

TT

SS

TTSTT


S

SS


GGGS
GGG
 .........500.........510.........520.........530.........540.........550.........560
Sequence THPRAQLADLMGAGLSDLVLIGPKSVRLYANTRDGFAKGKDVVQSGDITLPVPGADPRKLVAFSDVLGSG
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Known secondary structure (DSSP) SS

TT
TT
S
SSS
SS

TT
TTSSTTS
TTSSS
 .........570.........580.........590.........600.........610.........620.........630
Sequence QAHLVEVSATKVTCWPNLGRGRFGQPITLPGFSQPATEFNPAQVYLADLDGSGPTDLIYVHTNRLDIFLN
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Known secondary structure (DSSP) S

SS

TT









TTT

GGG
SSSSSS

SS
B
 .........640.........650.........660.........670.........680.........690.........700
Sequence KSGNGFAEPVTLRFPEGLRFDHTCQLQMADVQGLGVASLILSVPHMSPHHWRCDLTNMKPWLLNEMNNNM
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Known secondary structure (DSSP)
TTS
B
S

STT



TTS
TTSSSS

SSSSSS
S
SS
TTS
SS
 .........710.........720.........730.........740.........750.........760.........770
Sequence GVHHTLRYRSSSQFWLDEKAAALTTGQTPVCYLPFPIHTLWQTETEDEISGNKLVTTLRYARGAWDGRER
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Known secondary structure (DSSP) SSS






SS

TTT

TTTT
 .........780.........790.........800.........810.........820.........830.........840
Sequence EFRGFGYVEQTDSHQLAQGNAPERTPPALTKNWYATGLPVIDNALSTEYWRDDQAFAGFSPRFTTWQDNK
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Known secondary structure (DSSP)

TTS
S






S
GGGS


TTS





TT
 .........850.........860.........870.........880.........890.........900.........910
Sequence DVPLTPEDDNSRYWFNRALKGQLLRSELYGLDDSTNKHVPYTVTEFRSQVRRLQHTDSRYPVLWSSVVES
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Known secondary structure (DSSP)



STTTT

SS
TTTTS
S

SSS

 .........920.........930.........940.........950.........960.........970.........980
Sequence RNYHYERIASDPQCSQNITLSSDRFGQPLKQLSVQYPRRQQPAINLYPDTLPDKLLANSYDDQQRQLRLT
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Known secondary structure (DSSP)
TT
TT


TTS







SS

S
TTS
TTTTGGG

GGGS
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence YQQSSWHHLTNNTVRVLGLPDSTRSDIFTYGAENVPAGGLNLELLSDKNSLIADDKPREYLGQQKTAYTD
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Known secondary structure (DSSP) TTGGG

TT


STT
TT
TTS


 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence GQNTTPLQTPTRQALIAFTETTVFNQSTLSAFNGSIPSDKLSTTLEQAGYQQTNYLFPRTGEDKVWVAHH
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Known secondary structure (DSSP) SS
SS

SS

TT

GGGTTTS
GGGTT

SS

TT

 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence GYTDYGTAAQFWRPQKQSNTQLTGKITLIWDANYCVVVQTRDAAGLTTSAKYDWRFLTPVQLTDINDNQH
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Known secondary structure (DSSP)


GGGTT
SSTTS


TTSSS
TT

TTTT
TTS
 .........1200.........1210.........1220.........1230.........1240.........1250.........1260
Sequence LITLDALGRPITLRFWGTENGKMTGYSSPEKASFSPPSDVNAAIELKKPLPVAQCQVYAPESWMPPRLPP
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Known secondary structure (DSSP)
TTS
TTS

TTTS




SST

S

S
STTTT





S
 .........1270.........1280.........1290.........1300.........1310.........1320.........1330
Sequence HSLTLTTDRYDHDPEQQIRQQVVFSDGFGRLLQAAARHEAGMARQRNEDGSLIINVQHTENRWAVTGRTE
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Known secondary structure (DSSP) SS
TT
TT


TTS


S
TTS
SS
S
 .........1340.........1350.........1360.........1370.........1380.........1390.........1400
Sequence YDNKGQPIRTYQPYFLNDWRYVSNDSARQEKEAYADTHVYDPIGREIKVITAKGWFRRTLFTPWFTVNED
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Known secondary structure (DSSP)
TTS


S
SS



GGG

TTS

TTS

SS
 .........1410.........1420.........1430.........1440.........1450.........1460.........1470
Sequence ENDTAAEVDPKLYQKTPTVSVYDNRGLIIRNIDFHRTTANGDPDTRITRHQYDIHGHLNQSIDPRLYEAK
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Known secondary structure (DSSP) TTTTGGG

GGGTTT


TTS

SSTTS


TTS

 .........1480.........1490.........1500.........1510.........1520.........1530.........1540
Sequence QTNNTIKPNFLWQYDLTGNPLCTESIDAGRTVTLNDIEGRPLLTVTATGVIQTRQYETSSLPGRLLSVAE
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Known secondary structure (DSSP) TT
TT


S
TTS
TTT
TTS

TTS


TTS


 .........1550.........1560.........1570.........1580.........1590.........1600.........1610
Sequence QTPEEKTSRITERLIWAGNTEAEKDHNLAGQCVRHYDTAGVTRLESLSLTGTVLSQSSQLLIDTQEANWT
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Known secondary structure (DSSP)
TT
SS




TT
TT

SS
TTS
B
TT





 .........1620.........1630.........1640.........1650.........1660.........1670.........1680
Sequence GDNETVWQNMLADDIYTTLSTFDATGALLTQTDAKGNIQRLAYDVAGQLNGSWLTLKGQTEQVIIKSLTY
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Known secondary structure (DSSP) SS
TB
S


TTS

TTS

TTS

TTS

 .........1690.........1700.........1710.........1720.........1730.........1740.........1750
Sequence SAAGQKLREEHGNDVITEYSYEPETQRLIGIKTRRPSDTKVLQDLRYEYDPVGNVISIRNDAEATRFWHN
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Known secondary structure (DSSP)
TTS
TTS
TTTTTTTT
TT


S


TTBTT
 .........1760.........1770.........1780.........1790.........1800.........1810.........1820
Sequence QKVMPENTYTYDSLYQLISATGREMANIGQQSHQFPSPALPSDNNTYTNYTRTYTYDRGGNLTKIQHSSP
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Known secondary structure (DSSP)






TT

TT

S

SS



B
GGG
B

TTS

G
 .........1830.........1840.........1850.........1860.........1870.........1880.........1890
Sequence ATQNNYTTNITVSNRSNRAVLSTLTEDPAQVDALFDAGGHQNTLISGQNLNWNTRGELQQVTLVKRDKGA
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Known secondary structure (DSSP) GGT


SSSS
TTT
S
GGGSGGGB
TTSBBSBSSTT
B
TTS



TTS
 .........1900.........1910.........1920.........1930.........1940.........1950.........1960
Sequence NDDREWYRYSGDGRRMLKINEQQASNNAQTQRVTYLPNLELRLTQNSTATTEDLQVITVGEAGRAQVRVL
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Known secondary structure (DSSP)


TTS
TTTTTTS
TTSS
 .........1970.........1980.........1990.........2000.........2010.........2020.........2030
Sequence HWESGKPEDIDNNQLRYSYDNLIGSSQLELDSEGQIISEEEYYPYGGTALWAARNQTEASYKTIRYSGKE
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Known secondary structure (DSSP)


TTS
SS
TT


TTS

TTS
S
TT

B
GGG
 .........2040.........2050.........2060.........2070.........2080..
Sequence RDATGLYYYGYRYYQPWIGRWLSSDPAGTIDGLNLYRMVRNNPVTLLDPDGL
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Known secondary structure (DSSP)
TTS
TTTTTTSB

TTGGGG
S
TTBSGGG
TTT


SS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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