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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4m4eB_

Fold library idPDB HeaderMoleculeTitle
c4m4eB_PDB header: signaling proteinChain: B: PDB Molecule: tnf receptor-associated factor 4;PDBTitle: traf domain of human traf4


Added to library: Sat Sep 14 08:28:16 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ELEELSVGSDGVLIWKIGSYGRRLQEAKAKPNLECFSPAFYTHKYGYKLQVSAFLNGNGSGEGTHLSLYI
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Known secondary structure (DSSP)

GGG
B
TTS
STT




SSTT

TT

GGGTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence RVLPGAFDNLLEWPFARRVTFSLLDQSDPGKPQHVTETFHPDPNWKNFQKPGTWRGSLDESSLGFGYPKF
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Known secondary structure (DSSP)


TTGGGS
SS

















TT
GGGS
TTS

SS

 .........150.........160......
Sequence ISHQDIRKRNYVRDDAVFIRAAVELP
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Known secondary structure (DSSP) TSTTSSBTT



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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