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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4lo6B_

Fold library idPDB HeaderMoleculeTitle
c4lo6B_PDB header: protein transportChain: B: PDB Molecule: ha-70;PDBTitle: ha70-alpha2,6-sialc


Added to library: Sat Nov 2 08:28:28 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TQRVLPYSNGLYVINKGDGYIRTNDKDLIGTLLIEAGSSGSIIQPRLRNTTRPLFTTSNDTKFSQQYTEE
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S

S
STTTT
TT


SS
B


S
TTTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence RLKDAFNVQLFNTSTSLFKFVEEAPSDKNICIKAYNTYEKYELIDYQNGSIVNKAEYYLPSLGYCEVTNA
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Known secondary structure (DSSP)



SSB





SSS


TT
S

 .........150.........160.........170.........180.........190.........200.........210
Sequence PSPESEVVKMQVAEDGFIQNGPEEEIVVGVIDPSENIQEINTAISDNYTYNIPGIVNNNPFYILFTVNTT
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Known secondary structure (DSSP)

S
S








S

S





TTS


B
B
S

GGG
SS
BSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence GIYKINAQNNLPSLKIYEAIGSGNRNFQSGNLCDDDIKAINYITGFDSPNAKSYLVVLLNKDKNYYIRVP
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Known secondary structure (DSSP) GGG
S

TTTTSS


TTB







S
TTS

TT

 .........290.........300.........310.........320.........330.........340.........350
Sequence QTSSNIENQIQFKREEGDLRNLMNSSVNIIDNLNSTGAHYYTRQSPDVHDYISYEFTIPGNFNNKDTSNI
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Known secondary structure (DSSP)




S


SGGGGG
S




SSB




TT

SS


SS
 .........360.........370.........380.........390.........400.........410.........420
Sequence RLYTSYNQGIGTLFRVTETIDGYNLINIQQNLHLLNNTNSIRLLNGAIYILKVEVTELNNYNIRLHIDIT
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Known secondary structure (DSSP) SSSTT
BT



TT


SS
 .
Sequence N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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