Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4l37A_

Fold library idPDB HeaderMoleculeTitle
c4l37A_PDB header: protein bindingChain: A: PDB Molecule: silkworm storage protein;PDBTitle: sp2-sp3 - a complex of two storage proteins from bombyx mori hemolymph


Added to library: Sat Dec 7 08:28:44 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence FKTTPVDAAFVEKQKKILSLFYNVNEISYEAEYYKVAQDFNIEASKDCYTNMKAYENFMMMYKVGFLPKN
Predicted secondary structure

































SS confidence





































































Known secondary structure (DSSP)



TTTTTTS

TTS

GGG
GGGBS




TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence LEFSIFYEKMREEAIALFKLFYYAKDFECFYKTACYARVYMNQGMFLYAYYIAIIQRSDTASFVLPAPYE
Predicted secondary structure

















SS confidence





































































Known secondary structure (DSSP) S


TTSBSSS

TTTTTS



 .........150.........160.........170.........180.........190.........200.........210
Sequence AYPQYFVNMEVKNKMDYVKMMDGCLDEKICYNYGIIKENEQFVMYANYSNSLTYPNNEDRIAYLTEDVGL
Predicted secondary structure





































SS confidence





































































Known secondary structure (DSSP)
S
TTS
SSTTTT




TTTS
SGGGGGT
 .........220.........230.........240.........250.........260.........270.........280
Sequence NAYYYYFHSHLPFWWNSGKYGAFKERRGEIYFFFYQQLLARYYMERLTNGLGKIPEFSWYSPLRTGYLPP
Predicted secondary structure







































SS confidence





































































Known secondary structure (DSSP) S
TTB
SGGGGGGGGGTT

S




TTSS

B


 .........290.........300.........310.........320.........330.........340.........350
Sequence FNSFYYPFAQRSNDYELHTEKNYEEIRFLDIYEKTFFQYLQQGHFKAFDKKIDLHSSKAVNFVGNYWQTN
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP)
B
SS
B


B
TTSSSGGGSS
SSSTTSTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence ADLFEEDFLQFYQRSYEVNARRVLGAAPKPFNQYTFIPSALDFYQTSARDPAFYQLYKRIVQYIIEFKQY
Predicted secondary structure


























SS confidence





































































Known secondary structure (DSSP) GGGSS
SB

TTS






SBTTB



GGG
TTTGGGSGGG
 .........430.........440.........450.........460.........470.........480.........490
Sequence QVPYTQEALHFVGLKISDVKVDKMVTFFDHFDFDAFNTVYFSKEELKSSPHGYKVRQPRLNHKPFTVTID
Predicted secondary structure




































SS confidence





































































Known secondary structure (DSSP) S





TT


GGGS


TT






 .........500.........510.........520.........530.........540.........550.........560
Sequence IKSDVATNAVVKMFLGPKYDENGFPFSLEDNWMNFYELDWFVQKVNPGQSQITRSSTDFAFFKEDSLPMA
Predicted secondary structure



























SS confidence





































































Known secondary structure (DSSP) SS

B
TTS
B

GGG

SGGG
TT




 .........570.........580.........590.........600.........610.........620.........630
Sequence EIYKLLDQGKIPTDMFNSSDTMPSRLMLPKGTYDGFPFQLFVFVYPYEPTPKESEPFKAVVPDNKPFGYP
Predicted secondary structure















































SS confidence





































































Known secondary structure (DSSP) TTT
TTSGGGSS


BSS


B
S



SSS


SBSS
TTTT
 .........640.........650.........660.........670....
Sequence FDRPVLPQYFKQPNMFFKKVLVYHEGELFPYLFNIPHYTPDKAQ
Predicted secondary structure






























SS confidence











































Known secondary structure (DSSP) SSS


GGGGG
TT
S
SSGGGGS
TT







Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D